Hi,
You should run "correctheader" on any files where this is reported, as
these files do not strictly adhere to the nifti standard and can cause
problems (e.g. a shift of one voxel) but are easily fixed with this
command.
All the best,
Mark
On 19 Jun 2008, at 05:54, Burt Crepeault wrote:
> Hello all,
>
> I'm a new FSL user, just downloaded it last week. The main tool I'll
> be
> using for now is bet2 and when I first installed the FSL package,
> everything
> was working fine.
>
> This morning, hoping to accomplish some real work, I got this:
>
> helium:1005:# bet2 1.nii 2.nii --verbose
> ++ WARNING: nifti_read_buffer(1.nii):
> data bytes needed = 30146560
> data bytes input = 30146556
> number missing = 4 (set to 0)
> Segmentation fault
>
>
> Any help in troubleshooting this would be greatly appreciated. Some
> more info:
>
> - I'm on MAS OS X 10.5 and installed using fsl_installer.sh Version
> 1.0.5
> - the file 1.nii was converted from MINC format using MNI's mnc2nii
> tool
> - the warning about 4 bytes missing was also there when everything
> used to work
>
|