I am trying to figure out the proper syntax for the -roi option in fslmaths.
I tried:
fslmaths JHU_bilatATR5% -roi 0 182 112 218 0 182 JHU_bilatATR5%_maths
but got a segmentation fault.
Then I tried:
fslmaths JHU_bilatATR5% -roi < 0 > < 182 > < 112 > <218 > < 0 > < 182 > JHU_bilatATR5%_maths
and got an error message: "Missing name for redirect."
Sorry to ask this silly question, but it's not very straightforward from the documentation available how these commands should be written.
Stefano Marenco, NIMH
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