OK & thanks for the advice
Andy
On Thu, 2008-05-22 at 15:20 +0100, Rasmus Fogh wrote:
> Dear Andy,
>
> The data model has specific provision for handling this kind of situation.
> Unfortunately this has not been incorporated into the Analysis interface
> yet. It may be ready for version 2.0. Meanwhile we would recommend making
> a MolSystem with several identical chains, one for each conformation. This
> will be a bit more clunky, but it will enable you to store the
> information. In theory you could also have several molsystems with a chain
> each, but we think a single MolSystem will be more handy.
>
> The Molecules->Copy Chain Assignments command can help to copy
> assignements between chains, and if the situation is not too messy we will
> look at converting the result to proper data model objects once Analysis
> has caught up.
>
> I am afraid that is the best we can do at the moment.
>
> Yours,
>
> Rasmus
>
> ---------------------------------------------------------------------------
> Dr. Rasmus H. Fogh Email: [log in to unmask]
> Dept. of Biochemistry, University of Cambridge,
> 80 Tennis Court Road, Cambridge CB2 1GA, UK. FAX (01223)766002
>
> On Wed, 21 May 2008, Dr Andy Herbert wrote:
>
> > Hi,
> >
> > We have a protein which exists in multiple conformations. We are
> > wondering therefore, what is the currently recommended method for
> > handling this type of assignment within analysis.
> >
> > Cheers
> >
> > Andy
> >
> > --
> > Dr Andy Herbert
> > Department of Chemistry
> > University of Edinburgh
> > West Mains Road
> > Edinburgh
> > UK
> > EH9 3JJ
> > Tel: +44 (0)131 651 3042 or 650 7372
> > Email: [log in to unmask]
> >
> >
> > The University of Edinburgh is a charitable body, registered in
> > Scotland, with registration number SC005336.
> >
>
--
Dr Andy Herbert
Department of Chemistry
University of Edinburgh
West Mains Road
Edinburgh
UK
EH9 3JJ
Tel: +44 (0)131 651 3042 or 650 7372
Email: [log in to unmask]
The University of Edinburgh is a charitable body, registered in
Scotland, with registration number SC005336.
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