this is a bit odd, indeed, if you have used the distributed templates
(2x2x2 mm3, MNI space) for segmentation and then did simple VBM on it.
If I understood it correctly, you checked, that after segmentation/modulation
and smoothing your resulting smwc*img files are in alignment with the original
grey, white and CSF template as contained in the /tpm folder - is this
Maybe check this again with the unsmoothed images to go sure, that not only
and size are correct, but also AC/PC and matching of the cortical ribbon.
If this is still ok, next check if the resulting beta and con images are in
alignment with the templates.
Max Planck Institute of Psychiatry
NMR Research Group
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