This looks maybe like you tried to run the same command simultaneously
in the same TBSS analysis directory? Or possibly that you ran one
after a previously failed/interrupted one. Try deleting all empty
*.msf files and rerunning.
On 16 Apr 2008, at 21:43, Michael Lipton wrote:
> After several hours, this script crashed with the error:
>
> qsed: .commands: no such file or directory
> sed: .commands: no such file or directory
>
> The full output is below.
>
> I also noticed that the file xxx_FAi_to_target_nonlinear.nii.gz has
> a range different than the input: (-65.45, +43.75) vs. (0, +12000).
>
> Any guidance will be welcome...
>
> Thanks,
>
> Michael
>
>
>
> bash-3.2$ tbss_2_reg -T
> CT_aes_dti_FA_FAi_to_target
> CT_cl_dti_FA_FAi_to_target
> CT_dp_dti_FA_FAi_to_target
> CT_eg_dti_FA_FAi_to_target
> CT_gwi_dti_FA_FAi_to_target
> CT_ico_dti_FA_FAi_to_target
> CT_jra_dti_FA_FAi_to_target
> CT_kan_dti_FA_FAi_to_target
> CT_lp_dti_FA_FAi_to_target
> CT_lry_dti_FA_FAi_to_target
> CT_mab_dti_FA_FAi_to_target
> CT_mde_dti_FA_FAi_to_target
> CT_nho_dti_FA_FAi_to_target
> CT_rbo_dti_FA_FAi_to_target
> CT_sp_dti_FA_FAi_to_target
> CT_vj_dti_FA_FAi_to_target
> CT_vp_dti_FA_FAi_to_target
> CT_wmu_dti_FA_FAi_to_target
> PT_bm_dti_FA_FAi_to_target
> PT_ch_dti_FA_FAi_to_target
> PT_dk_dti_FA_FAi_to_target
> PT_ema_dti_FA_FAi_to_target
> PT_ero_dti_FA_FAi_to_target
> PT_fjo_dti_FA_FAi_to_target
> PT_hc_dti_FA_FAi_to_target
> PT_le_dti_FA_FAi_to_target
> PT_mbo_dti_FA_FAi_to_target
> PT_mco_dti_FA_FAi_to_target
> PT_mtu_dti_FA_FAi_to_target
> PT_nc_dti_FA_FAi_to_target
> PT_pel_dti_FA_FAi_to_target
> PT_pw_dti_FA_FAi_to_target
> PT_rav_dti_FA_FAi_to_target
> PT_sai_dti_FA_FAi_to_target
> PT_sec_dti_FA_FAi_to_target
> PT_sro_dti_FA_FAi_to_target
> PT_wtr_dti_FA_FAi_to_target
> PT_yca_dti_FA_FAi_to_target
> qsed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> sed: .commands: No such file or directory
> 11922
> bash-3.2$ q
>
---------------------------------------------------------------------------
Stephen M. Smith, Professor of Biomedical Engineering
Associate Director, Oxford University FMRIB Centre
FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
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