Andreas Förster schrieb:
> Looks like a was a bit too quick with my reply this morning. When I
> came back from the meeting I was rushing to, I noticed that not all is
> good with O on OSX.
>
> While bash (terminal or xterm) doesn't freeze, it stops echoing what
> one types. Below it the output from hitting enter six times and then
> typing ls. Any ideas how to fix this?
>
> As4> Graphics released.
> (dyn1210-244) ~: (dyn1210-244) ~: (dyn1210-244) ~: (dyn1210-244) ~:
> (dyn1210-244) ~: (dyn1210-244) ~: (dyn1210-244) ~: Desktop/
> Documents/ Public/ Downloads/ DepositFiles/
> Sites/ My Documents/ More Applications/ Music/
> (dyn1210-244) ~:
>
On Unix/Linux just enter
stty sane
>
> Andreas
>
>
>
> Andreas Förster wrote:
>> Hey Raja,
>>
>> this might not be directly helpful, but...
>>
>> I remember the same problem. I had to quit the terminal after
>> shutting down O (11.0.5, Build 070605, on OSX 5.2). When I tried to
>> recreate this problem just now, everything worked fine. Bash returns
>> with the prompt after I quit O.
>>
>> Is your computer up to date?
>>
>>
>> Andreas
>>
>>
>>
>> Raja Dey wrote:
>>> Hi All,
>>> Every time I quit from 'O' (version 11.0.5) my bash
>>> terminal freezes. Otherwise 'O' is working fine. Does anyone have
>>> the same experience? Is there any solution to this? I am using 13"
>>> macbook leopard (OSX 10.5) with intel core 2 duo. I enclosed the
>>> text I got on the task window after opening 'O'. anand2:~ rajadey$ ono
>>> No dials
>>> Mono enabled only
>>> Gamepad disabled
>>> ODAT environment variable :/usr/local/ono/data/
>>> O > O for Mac & Intel processors.
>>> O > Use of this program, implies acceptance of the present
>>> O > set of conditions of use.
>>> O > Contact [log in to unmask] if in doubt.
>>> O > O version 11.0.5, Build 070605
>>> O > Define an O file (terminate with blank): O > Menu names are
>>> not defined.
>>> O > Enter file name [/usr/local/ono/data/menu.odb]: O >
>>> menu.odb file for O version 11.0.5, 070605
>>> O > Database compressed.
>>> O > Database compressed.
>>> O > Database compressed.
>>> O > Database compressed.
>>> O > Database compressed.
>>> O > Database compressed.
>>> O > Forsyth & Wells Scattering Factors Acta Cryst 12 (1959) 412-5
>>> O > Startup file was never loaded
>>> O > Enter file name [/usr/local/ono/data/startup.odb]: O >
>>> startup.odb file for O v0 050807
>>> O > Stereochemistry file was never loaded
>>> O > Enter file name [/usr/local/ono/data/stereo_chem.odb]: O >
>>> stereochemistry amino acids and nucleic acids, Date: 030213
>>> O > RNA conformers, 030213
>>> O > HIS C O connection
>>> O > TYR ATOM/fragment_all corrected
>>> O > 021128 Fragment_ALL, modify ATOM records to use \, main-chain
>>> RNA fix
>>> O > 021127 Connectivty CONNECT_ALL
>>> O > 021112 PRO changed to be flexible ring pucker, different
>>> side-chain angles
>>> O > 021113 AGCU added 2 'dummy' torsion_flexibles to allow
>>> build_res C option
>>> O > 021113 AGCU sugar pucker flexible on advice of Phil Evans,
>>> email 010613
>>> O >
>>> O > JCS (20030215)
>>> O > Modified DNA to include connect_all, centre, atom, and
>>> modified whole
>>> O > file to use ' instead of * (for CNS output)
>>> O > JCS (20061008)
>>> O > Finally made stereo_chem_gly the default. Has a lot of
>>> sugar information
>>> O > JCS (20071008)
>>> O > This is the CNS/DNA freindly version of stereo_chem.odb and
>>> is default
>>> O > for James's custom O database. Here's what it has:
>>> O > 1. DNA is default.
>>> O > 2. Primes (') instead of stars (*) for the sugars in
>>> nucleic acid.
>>> O > 3. C5A instead of C7 for the exocyclic methyl in thymidine.
>>> O > 4. James's special torsion definitions for building
>>> nucleic acids:
>>> O > chi, chi', alpha, alpha', beta, beta', gamma, gamma',
>>> O > delta, and delta'
>>> O > 5. The Ile delta carbon takes the CNS name (CD) instead
>>> of the
>>> O > standard (CD1)
>>> O >
>>> O > read ok
>>> O > No codes checked
>>> O > Connectivity used is : all
>>> O > There were 63 residues.
>>> O > 646 atoms.
>>> O > ODAT in use : /usr/local/ono/data/
>>> O > Number of mouse buttons 3
>>> O > Default fog values have been defined
>>> O > These are in ODB .ogl_light entries 14-16
>>> O > Making visibility data structures.
>>> O > Making visibility data structures.
>>> As4> ......No message from the O administrator........
>>> Heap> dial_speed_sgi.odb - gerard kleywegt @ 940120/940825
>>> Heap>
>>> Heap> toggle between fast dials (e.g., for tor_res) and
>>> Heap> slow dials (e.g., while rotating) on SGIs
>>> Heap>
>>> Heap> type:
>>> Heap> menu @fast_dials on on
>>> Heap> menu @slow_dials on on
>>> Heap> menu @faster on on
>>> Heap> menu @slower on on
>>> Heap>
>>> Heap> Database compressed.
>>> Heap>
>>> Heap> Datablock file read successfully !
>>> Heap>
>>> New> Number of mouse buttons 3
>>>
>>> Thanks...
>>> RD
>>>
>>>
>>> ------------------------------------------------------------------------
>>>
>>> Best Jokes, Best Friends, Best Food. Get all this and more on Best
>>> of Yahoo! Groups.
>>> <http://in.rd.yahoo.com/tagline_groups_11/*http://in.promos.yahoo.com/groups/bestofyahoo/>
>>>
>>
>
--
Joachim
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