Hello,
If the 'Show Assignments' check button is not checked then the graphics is
supposed to show all the atoms. If it is checked it is supposed to show
only the assigned atoms. Are people finding this wording confusing or is
this not working as stated (we just tried here and it seemed ok)?
Tim is not sure if the Pro O is just a wonky coordinate we happened to get
(from somewhere) or what.
Wayne
On Wed, 5 Mar 2008, Vicky Higman wrote:
> > Anyone else missing the atom labels from the graphics in the
> > Molecules->Residue information popup?
>
> Yes, but if you click on 'Show Assignments' they appear - the toggle is
> working the wrong way round, I think.
>
> > Also, the Gly & Pro representations seem to be mangled with extra
> > bonds etc.
>
> Looked okay to me (it makes more sense once you have the assignments
> switched on and heteroatoms are coloured), but the positioning of the
> oxygen in Pro is rather strange.
>
>
> >
> > I'm also getting
> >
> > Deprecated: getByKey called with too short key
> > from doLoad line 770 in
> > /usr/local/ccpnmr/ccpnmr1.0/python/memops/format/xml/XmlIO.py:
> > [" obj = oo.getByKey(endMap['class'],useKey)\n"]
> > .....
> >
>
> That always happens and I was told that there is nothing to worry about
> here.
>
> Vicky
>
>
>
> --
> ****************************************************
> Dr. Victoria A. Higman
> Leibniz-Institut fuer Molekulare Pharmakologie (FMP)
> NMR-Supported Structural Biology
> Robert-Roessle-Str. 10
> 13125 Berlin
> Germany
> E-mail: [log in to unmask]
> ****************************************************
>
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