Dear FSL users,
I am trying to run TBSS on the the parallel direction L1. I am using
Can I just copy the *to_target_affine.dof and the *to_target_nonlinear.dof
and .msf to the directory where I rescaled L1s (with tbss_1_preproc) and
apply tbss_3_postreg? If yes, which target should I used the one I used for
FA or its corresponding L1 map?
Also I noticed that the values of CSF in the L1 map are high enough to stay
above the threshold of 2000? It means that the CSF is going to be part of
the L1 skeleton. Can you please help?
thanks a lot!
Paul Geha M.D.
The Feinberg School of Medicine
Department of Physiology M211
303 E. Chicago Ave.
Chicago, IL 60611