Hello,
I have loaded fMRI dataset using dicomnifti package and did
fslorient &fslswapdim. The images were upside-down. Ok, I ran
fslswapdim x y -z to correct it and loaded file in fslview. The image
is still upside-down, just the position markers swapped :-(. To make
sure where the problem is I loaded nii file in SPM and tried
coregistration and - not surprisingly - both swaped and non-swaped
files look exactly the same. So here is my question: is it fslwapdim
bug or am I missing something ?
George
P.S: On both, Ubuntu Feisty i386 nad 7.10 x64 are following packages
have been kept back: dicomnifti fsl fslview nifti-bin so I do not
have the most recent builds :-(
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