Hi - the most likely reason for this is not having enough available RAM:
http://www.fmrib.ox.ac.uk/fslfaq/#general_ram
Cheers.
On 19 Feb 2008, at 14:43, Chris Kell wrote:
> Dear FSLers!
>
> I get an error message that I do not understand when I try to run
> tbss_deproject of a cluster that I obtained from a contrast.
> I calculated grot by: fslmaths tbss_maxc_tstat2 -thr 0.95 grot
> which creates the grot file in my stats directory.
> After running tbss_deproject grot 1 the following error message
> occurs:
> /apps/prod/i686/fsl-4.0.2/bin/tbss_deproject: line 94: 5293 Aborted
> §FSLDIR/bin/tbss_skeleton -i mean_FA -p 'cat thresh.txt'
> mean_FA_skeleton_mask_dst $FSLDIR/data/standard/LowerCingulum_1mm
> all_FA
> ${IN}_tmp -D $IN
>
> The output file grot_to_all_FA is not created.
> thresh.txt contains the single value 2000, which I entered during
> tbss.
> The other three files (mean_FA; mean_FA_skeleton_mask_dst, and
> all_FA) are
> all in the stats directory.
>
> Does someone have a good idea how to fix this problem?
>
> Thanks for your help, Chris
>
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Stephen M. Smith, Professor of Biomedical Engineering
Associate Director, Oxford University FMRIB Centre
FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
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