Hello,
I'm having some trouble with a sagittal offset of some T1 images in FSL 4.0.
Here's what they look like in FSL3.3:
http://fmrif.nimh.nih.gov/~adamt/nifti_woes/fslview-old.jpg
Here's what they look like in FSL4.0:
http://fmrif.nimh.nih.gov/~adamt/nifti_woes/fslview-new.jpg
And here's an example of an offending image:
http://fmrif.nimh.nih.gov/~adamt/nifti_woes/FSPGR1.nii.gz
Perhaps this is same problem Matthew Hoptman was experiencing? (subj:
location masks shift from FSL3.3 to FSL4.0)
I think the last program to touch these images was Flirt version 5.4.2
cheers,
-Adam
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