Probably the most robust and simple fix is to use fslroi to cut down
the input field of view first.
Cheers.
On 18 Sep 2007, at 03:53, Buyean Lee wrote:
> Dear FSL users,
>
> The accuracy of BET in monkey MRIs seems to be very sensitive to
> the option -c < x y z> (centre-of-gravity).
> Since two input images have different center-of-gravity, I wonder
> if one can use separate -B "bet options" for input1 and input2
> images in SIENA.
>
> If not, can we run SIENA after running BETs for input images manually?
>
> Thank you,
>
> Buyean
>
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Stephen M. Smith, Professor of Biomedical Engineering
Associate Director, Oxford University FMRIB Centre
FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
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