Steve:
As you suggested, I ran:
fast -t1 -os -op -c 4 -od AnatSeg1 AllAnat1.nii
avwcpgeom AllAnat1.nii AnatSeg1_seg.nii.gz
3dcopy AnatSeg1_seg.nii.gz AnatFSLSeg
Worked like a charm!
This must mean FAST didn't copy the header from the input to the output file
properly.
FSL, this would be a very helpful fix to streamline interoperability.
Thank you,
Dan Kelley
University of Wisconsin
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