> >
> > Did you use the formatConverter? If you use the Pdb format, then the
> > input has to be an official PDB file. Otherwise use pseudoPdb, and
> > select the naming system. It should handle multiple models without
> > problem (though there might be problems if it does not recognize the
> > end-of-model string).
>
> Many thanks I have got import of multiple pdbs to work as you
> suggested by using pseudopdb. However, now the structures don't seem to
> be being put into a single structure generation and my restraint
> violation analysis seems to be only against a single structure ....
> help again!
Incidentally, for those of you using Analysis to do the violation
analysis, then at the moment it only uses one structure model at a time.
However, from the next version Analysis has the ability to use ensembles
throughout. Here the data model object to define the ensemble is
StructureGroup where isEnsemble=True.
T.
-------------------------------------------------------------------------------
Dr Tim Stevens Email: [log in to unmask]
Department of Biochemistry [log in to unmask]
University of Cambridge Phone: +44 1223 766018 (office)
80 Tennis Court Road +44 7816 338275 (mobile)
Old Addenbrooke's Site +44 1223 364613 (home)
Cambridge CB2 1GA WWWeb: http://www.bio.cam.ac.uk/~tjs23
United Kingdom http://www.pantonia.co.uk
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