JiscMail Logo
Email discussion lists for the UK Education and Research communities

Help for TB-SUPPORT Archives


TB-SUPPORT Archives

TB-SUPPORT Archives


TB-SUPPORT@JISCMAIL.AC.UK


View:

Message:

[

First

|

Previous

|

Next

|

Last

]

By Topic:

[

First

|

Previous

|

Next

|

Last

]

By Author:

[

First

|

Previous

|

Next

|

Last

]

Font:

Proportional Font

LISTSERV Archives

LISTSERV Archives

TB-SUPPORT Home

TB-SUPPORT Home

TB-SUPPORT  June 2007

TB-SUPPORT June 2007

Options

Subscribe or Unsubscribe

Subscribe or Unsubscribe

Log In

Log In

Get Password

Get Password

Subject:

Re: EFDA-JET failing SAM CE tests

From:

Yves Coppens <[log in to unmask]>

Reply-To:

Testbed Support for GridPP member institutes <[log in to unmask]>

Date:

Fri, 8 Jun 2007 15:46:02 +0100

Content-Type:

TEXT/PLAIN

Parts/Attachments:

Parts/Attachments

TEXT/PLAIN (157 lines)

Hi Dave,

When the job are finished you should check that the outputs are copied 
back to the CE (or that there is nothing in the pbs undelivered dir on 
the workers). Otherwise, have a look at:

http://grid-deployment.web.cern.ch/grid-deployment/eis/docs/Maradona

I also saw the two following errors:

- Got a job held event, reason: Globus error 158: the job manager could 
not lock the state lock file
- Got a job held event, reason: Unspecified gridmanager error
Job got an error while in the CondorG queue.

Unfortunately, I am unable pinpoint what is going wrong.

Yves


On Fri, 8 Jun 2007, David Robson wrote:

> I have just logged on to our CE as dteam001 and submitted a number of 
> jobs via qsub.  We now have
> a job running on every processor, so I assume the worker nodes are OK.  
> Or is there more I
> can test?
> 
> Dave
> 
> Yves Coppens wrote:
> > Hi Dave,
> >
> > I've looked at the sam tests for your site. I can see a pattern of 
> > successes and failures with the infamous "Cannot read JobWrapper output,  
> > both from Condor and from Maradona" error. It could then be that there is 
> > a problem with one your workers rather than a problem associated with the 
> > user mappings. Have you checked for this?
> >
> > Thanks,
> >
> > Yves 
> >
> > On Fri, 8 Jun 2007, David Robson wrote:
> >
> >   
> >> Hi Yves,
> >>
> >>   Thanks for that.  Strangely, out site started passing the SAMCE tetsts 
> >> overnight.  I modified
> >> /opt/edg/etc/edg-mkgridmap.conf as you suggested, and now we are back to 
> >> failed tests!
> >>
> >> IS there anything else we need to do?
> >>
> >>
> >> Yves Coppens wrote:
> >>     
> >>> Hi Dave,
> >>>
> >>>   
> >>>       
> >>>> Our version of yaim is glite-yaim-3.0.0-34
> >>>>     
> >>>>         
> >>> Earlier version than I thought, but I think the problem is still the one 
> >>> below, except that the file is /opt/edg/etc/lcmaps/gridmapfile and not 
> >>> /opt/edg/etc/edg-mkgridmap.conf, sorry for this. I had a look at 
> >>> gridmapfile on your CE and it has entries such .atlasprg and .atlasprd 
> >>> which should be replaced by atlasprg and atlasprd, respectively, and for 
> >>> all VOs. You can run something like:
> >>>
> >>> perl -p -i.bak -e 's/\.(\w+)sgm/$1sgm/g' gridmapfile
> >>>
> >>> and then for prd again, but I haven't tested the regex.
> >>>
> >>>   
> >>>       
> >>>> Is this the problem?  Should we upgrade? Just yaim or all glite ?
> >>>>     
> >>>>         
> >>> I would not upgrade now, but try to get your site working first.
> >>>
> >>> Yves
> >>>
> >>>   
> >>>       
> >>>> Dave
> >>>>
> >>>>  Yves Coppens wrote:
> >>>>     
> >>>>         
> >>>>> Hi David,
> >>>>>
> >>>>> If your version of yaim is glite-yaim-3.0.1-* ,then the problem may be in:
> >>>>>
> >>>>> /opt/edg/etc/edg-mkgridmap.conf. If you do not have no sgm and prd pool
> >>>>> accounts but single accounts, it should like:
> >>>>>
> >>>>> "/VO=ops/GROUP=/ops/ROLE=lcgadmin/Capability=NULL" opssgm
> >>>>> "/VO=ops/GROUP=/ops/ROLE=lcgadmin" opssgm
> >>>>> "/VO=ops/GROUP=/ops/ROLE=production/Capability=NULL" opsprd
> >>>>> "/VO=ops/GROUP=/ops/ROLE=production" opsprd
> >>>>> "/VO=ops/GROUP=/ops/Role=NULL/Capability=NULL" .ops
> >>>>> "/VO=ops/GROUP=/ops" .ops
> >>>>>
> >>>>> for the ops VO. If you do have pool accounts then opssgm should be 
> >>>>> replaced by .opssgm (which is what yaim does). The same holds for the prd 
> >>>>> account and other sgm and prd VO accounts.
> >>>>>
> >>>>> Yves
> >>>>>
> >>>>>
> >>>>> On Thu, 7 Jun 2007, David Robson wrote:
> >>>>>
> >>>>>   
> >>>>>       
> >>>>>           
> >>>>>> Yesterday, we were frequently failing the SAM CE tests, although non-OPS 
> >>>>>> VO jobs seemed to be OK.
> >>>>>>
> >>>>>> After following the discussions in the news groups, I reached the 
> >>>>>> conclusion that the problem was
> >>>>>> due to the lack of sgm and prd accounts.  Therefore I added lines of the 
> >>>>>> form
> >>>>>>
> >>>>>>
> >>>>>> 50601:opssgm001:1932:ops:ops:sgm:
> >>>>>> 51301:opsprd001:1932:ops:ops:prd:
> >>>>>>
> >>>>>> to users.conf for each VO, and then ran configure_node on the CE and all 
> >>>>>> WNs.  Now we are failing ALL our SAM CE tests.
> >>>>>> I reversed the change by deleting the new accounts from user.conf and 
> >>>>>> running configure_node on the CE and WNs again,
> >>>>>> but we are still failing ALL the tests.  I don't see anything wrong in 
> >>>>>> the globus-gatekeeper logs, I can su to ops001 and prove
> >>>>>> that ssh between the WN nodes is OK, and I can submit jobs internally 
> >>>>>> with qsub.
> >>>>>>
> >>>>>> Any ideas anyone on how to debug this?
> >>>>>>
> >>>>>> Thanks in advance
> >>>>>>
> >>>>>> Dave
> >>>>>>
> >>>>>>     
> >>>>>>         
> >>>>>>             
> >>>>>   
> >>>>>       
> >>>>>           
> >>>   
> >>>       
> >
> >   
> 

Top of Message | Previous Page | Permalink

JiscMail Tools


RSS Feeds and Sharing


Advanced Options


Archives

April 2024
March 2024
February 2024
January 2024
December 2023
November 2023
October 2023
September 2023
August 2023
July 2023
June 2023
May 2023
April 2023
March 2023
February 2023
January 2023
December 2022
November 2022
October 2022
September 2022
August 2022
July 2022
June 2022
May 2022
April 2022
March 2022
February 2022
January 2022
December 2021
November 2021
October 2021
September 2021
August 2021
July 2021
June 2021
May 2021
April 2021
March 2021
February 2021
January 2021
December 2020
November 2020
October 2020
September 2020
August 2020
July 2020
June 2020
May 2020
April 2020
March 2020
February 2020
January 2020
December 2019
November 2019
October 2019
September 2019
August 2019
July 2019
June 2019
May 2019
April 2019
March 2019
February 2019
January 2019
December 2018
November 2018
October 2018
September 2018
August 2018
July 2018
June 2018
May 2018
April 2018
March 2018
February 2018
January 2018
December 2017
November 2017
October 2017
September 2017
August 2017
July 2017
June 2017
May 2017
April 2017
March 2017
February 2017
January 2017
December 2016
November 2016
October 2016
September 2016
August 2016
July 2016
June 2016
May 2016
April 2016
March 2016
February 2016
January 2016
December 2015
November 2015
October 2015
September 2015
August 2015
July 2015
June 2015
May 2015
April 2015
March 2015
February 2015
January 2015
December 2014
November 2014
October 2014
September 2014
August 2014
July 2014
June 2014
May 2014
April 2014
March 2014
February 2014
January 2014
December 2013
November 2013
October 2013
September 2013
August 2013
July 2013
June 2013
May 2013
April 2013
March 2013
February 2013
January 2013
December 2012
November 2012
October 2012
September 2012
August 2012
July 2012
June 2012
May 2012
April 2012
March 2012
February 2012
January 2012
December 2011
November 2011
October 2011
September 2011
August 2011
July 2011
June 2011
May 2011
April 2011
March 2011
February 2011
January 2011
December 2010
November 2010
October 2010
September 2010
August 2010
July 2010
June 2010
May 2010
April 2010
March 2010
February 2010
January 2010
December 2009
November 2009
October 2009
September 2009
August 2009
July 2009
June 2009
May 2009
April 2009
March 2009
February 2009
January 2009
December 2008
November 2008
October 2008
September 2008
August 2008
July 2008
June 2008
May 2008
April 2008
March 2008
February 2008
January 2008
December 2007
November 2007
October 2007
September 2007
August 2007
July 2007
June 2007
May 2007
April 2007
March 2007
February 2007
January 2007
December 2006
November 2006
October 2006
September 2006
August 2006
July 2006
June 2006
May 2006
April 2006
March 2006
February 2006
January 2006
December 2005
November 2005
October 2005
September 2005
August 2005
July 2005
June 2005
May 2005
April 2005
March 2005
February 2005
January 2005
December 2004
November 2004
October 2004
September 2004
August 2004
July 2004
June 2004
May 2004
April 2004
March 2004
February 2004
January 2004
December 2003
November 2003
October 2003
September 2003
August 2003
July 2003
June 2003
May 2003
April 2003
March 2003
February 2003
January 2003
December 2002
November 2002
October 2002
September 2002
August 2002
July 2002
June 2002
May 2002
April 2002
March 2002
February 2002
January 2002


JiscMail is a Jisc service.

View our service policies at https://www.jiscmail.ac.uk/policyandsecurity/ and Jisc's privacy policy at https://www.jisc.ac.uk/website/privacy-notice

For help and support help@jisc.ac.uk

Secured by F-Secure Anti-Virus CataList Email List Search Powered by the LISTSERV Email List Manager