hi,
thank you for the replies.
>I'm not sure why it doesn't work for you - are you sure you don't
>have fslview aliased to a longer command,
indeed, this was the problem. i had fslview aliased. i changed it to:
alias fslview 'fslview \!* &'
>> (2) Are the lookup tables listed in the 'Overlay Information
>> Dialog' stored as external files?
>
>Not all of them - some are in $FSLDIR/etc/luts
this explains why i could not find them. in the end, it did not matter.
>> (3) I see that fslview uses the lut name stored in 'aux_file' in an
>> AVW .hdr field. Might fslview look at
>> another header field for transparency?
>
>It could, but that would need a change to the NIFTI definition, and
>I'm not sure it makes sense to decide in general what an image's
>transparency should be - it would be more generally useful I think to
>be able to set transparency on the command line - and that is on our
>TODO list.
which is on my Wish List. :) well, my real wish is to be able to specify lut and transparency in
'overlay' for n-many image volumes.
thanks again,
- bettyann
|