Hi,
difficult to say - did you maybe run out of disc space? tbss_2_reg is
just a simple shell script - if you're familiar with shell scripting
it should be straightforward to sort out how it works. If you want to
register just a single file the easiest is to simply run the script
again. If target.hdr exists the script will use the target. Also, it
will skip all blah_FAi.??? files for which there is a
blah_to_blah_nonlinear.msf file. Simply remove the msf file for the
one file that needs re-doing and all should be fine
cheers
christian
On 1 Jan 2007, at 17:33, Tal Herbsman wrote:
> I just finished up TBSS non linear reg step (tbss_2_reg).
>
> For some reason there was not a subject_to_target_FAi_nonlinear.dof
> file
> generated for one of the subjects. the .msf file exists and there
> does not
> seem to have been a similar issue for any other registration for
> this or any
> other subjects (this subject was registered to every other subject
> just fine).
>
> Unfortunately I did not keep logs of the tbss_2_reg step. Any ideas
> how I
> can go ahead and debug this problem? Is there a quick way of
> reregistering
> just this subject to the specific target.
>
> Thanks,
>
> Tal.
>
> ---------
> Tal Herbsman, MD
> Psychiatry
> Medical University of South Carolina
--
Christian F. Beckmann
Oxford University Centre for Functional
Magnetic Resonance Imaging of the Brain,
John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK
Email: [log in to unmask] - http://www.fmrib.ox.ac.uk/~beckmann/
Phone: +44(0)1865 222551 Fax: +44(0)1865 222717
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