Thank you,
Problem fixed.
On second inspection I noticed that it had actually only mis-allocated
the second half of my sequence.
Wim renumbered my sequence a few months ago half way through my
assignment. I didn't check the atom browse window at the time but then
again the AtomBrowse mis-allocation didn't seem to follow any other part
of my sequence (ie. random) so I don't think that's related.
On Thu, 2005-11-10 at 16:55 +0000, Tim Stevens wrote:
> > I have a very strange atom browse table. Each residue seems to have the
> > wrong atoms associated to it. This mis-allocation seems to be random
> > too! I have no idea how this happened. It was fine a few days ago.
> > Attached are some screenshots.
>
> How very strange. Some of your atom set mapping objects have gone
> missing... I'd be interested to know if something triggered this.
>
> Anyhow this should be very easy to fix. On the Python command line type:
>
> >>> for cm in top.project.chainMappings:
> ... cm.delete()
> ...
>
> Save the project, quit and reload. When the project initialises the atom
> set mappings will all be regenerated, hopefully correctly.
>
> T.
>
> -------------------------------------------------------------------------------
> Dr Tim Stevens Email: [log in to unmask]
> Department of Biochemistry [log in to unmask]
> University of Cambridge Phone: +44 1223 766022 (office)
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> Cambridge CB2 1GA WWWeb: http://www.bio.cam.ac.uk/~tjs23
> United Kingdom http://www.pantonia.co.uk
> -------------------------------------------------------------------------------
> ------ +NH3CH(CH(CH3)OH)C(O)NHCH(CH(CH3)CH2CH3)C(O)NHCH(CH2CH2SCH3)CO2- -------
> -------------------------------------------------------------------------------
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