I think you need to adjust the FOV - details are at
in the FAQ (last paragraph). Hope this helps
> Hi Mark,
> I'm a bit confused about how applyxfm works. I am trying to apply
> func2standard.mat to func.img. But when I set the reference image to
> func.img (or to hires.img), the resulting image goes off the screen. I
> know that the func2standard.mat is correct because I get good
> registration when the reference is standard.img.
> If I use the gui to set output size based on voxel dimensions (where the
> dimensions are equal to func.img), then I get: AvwReadVolume: Error 0.
> Basically, I would like to take several func.img's, align them with
> standard.img but keep them in func.img space. Any idea what I'm doing
> many thanks,