Dear Mark -
Thanks for your prompt response, and sorry that I did not mention the reason
in my previous email. I want to use AFNI TTatlas+tlrc Dataset as a reference
to understand the anatomical location of the activation of my data processed
by FSL (i.e. to use "Talairach to", "Where Am I", and "Atlas Colors" feature
in AFNI). To do this, I guess I need to use Talairach View in the AFNI,
don't I? Thanks again for your help!
> I'm also afraid that I don't know the status of Talairach
> coordinate viewing in AFNI for Analyze images. You can get
> coordinates in FSL by using FSLView or img2talcoord but I'm
> afraid they are the only options.
> All the best,
> On 20 Nov 2004, at 05:34, Jia Liu wrote:
> > Dear all,
> > I am new to FSL, and have several rudimentary questions (I searched
> > both FSL
> > and ANFI website and their mailing lists, but failed to find the
> > answer).
> > 2) AFNI visualization
> > After processing data with FSL (ver 3.2) and creating links with
> > feat2afni,
> > AFNI (ver 2.56f) is able to display both anatomical (e.g. hires.hdr)
> > and
> > functional (e.g. example_func.hdr) data properly. However, the
> > Talairach
> > View option is disabled, but the transformation matrix is stored in reg
> > folder (e.g. example_func2highres.xfm). Is there any way to load this
> > transformation matrix in AFNI? Or did I missed any step?
> > Thanks a lot!
> > Jia