Dear all,
I am new to FSL, and have several rudimentary questions (I searched both FSL
and ANFI website and their mailing lists, but failed to find the answer).
1) Data preparation
To convert Siemens DICOM format (generated by Siemens Trio 3T) to FSL
analyze4d, I use mri_convert (freesurfer, MGH) and avwmerge, and then
modified the coordinates of the data. The converted data looks fine, but I
am wondering whether there is an easier way to prepare data.
2) AFNI visualization
After processing data with FSL (ver 3.2) and creating links with feat2afni,
AFNI (ver 2.56f) is able to display both anatomical (e.g. hires.hdr) and
functional (e.g. example_func.hdr) data properly. However, the Talairach
View option is disabled, but the transformation matrix is stored in reg
folder (e.g. example_func2highres.xfm). Is there any way to load this
transformation matrix in AFNI? Or did I missed any step?
Thanks a lot!
Jia
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