Dear Mark,
I am using RH7.3. Loading flirt_noopt in my machine, here is the error
mesage.
flirt: error while loading shared libraries: libstdc++.so.5: cannot open
shared object file: No such file or directory
Meanwhile, the total time point is 867 and Tr=2.5
Thanks!
wei
On Mon, 24 May 2004, Mark Jenkinson wrote:
> Hi,
>
> Have you looked at:
> http://www.fmrib.ox.ac.uk/fslfaq/#flirt_crash
> ?
>
> There are some problems on RH9 which can be fixed by using
> the non-optimised version. Otherwise, converting to standard
> space does take up a lot of memory and disk. How many time
> points are you trying?
>
> All the best,
> Mark
>
>
>
> On Monday, May 24, 2004, at 02:57 pm, Wei Qiu wrote:
>
> > Dear all,
> >
> > I am getting into trouble for registering a
> > functional data (45 minutes, 142049280b) into MNI tal space.
> >
> > Here is what I did.
> >
> > 1) get the example_func2standard.mat (functional--> ana--> standard)
> > 2) then flirt the functional into MNI space
> > flirt -in f_brain -ref standard -out f_brain2stand -init
> > example_func2standard.mat -applyxfm
> >
> > while i ran it, the program aborted. I guess the problem is our data
> > is too big.
> >
> > 3) Then I splited the data into 3 pieces in time domain and then used
> > the
> > flirt command as above. It worked well for each piece. Now I have to
> > concatenate it back.
> >
> > avwmerge -t outfile a b c
> >
> > As always "The segmentation fault" error message came out.
> > Our computer is in huge RAM (4GBRAM, 8GB swap space and 3TB).
> >
> > Did I make mistake somewhere. Any suggestion will be greatly
> > appreciated!
> >
> > Thanks again!
> >
> > Wei
>
|