Seems to have worked Jon, thanks very much!
Quoting Jonathan Brooks <[log in to unmask]>:
> Hi Donna,
> Type "ls -ln" to look in the reg directory containing the highres.hdr/.img
> They should point to where the files were kept on the original machine.
> Be sure that they are links and not the files themselves, the output
> of the above command will be something like:
> lwrxwrxwrx blah blah blah highres.hdr
> The "l" at the beginning tells you its a link.
> next remove the links:
> rm highres.hdr
> rm highres.img
> next find where the relevant highres files are on the new machine
> e.g. /usr/local/grot/doh/blah/highres.hdr
> in the dir where you removed the links type:
> ln -s /usr/local/grot/doh/blah/highres.hdr .
> ln -s /usr/local/grot/doh/blah/highres.img .
> type ls -ln again to check the links are pointing to the right place
> and off you go!
> Good luck,
> In message <[log in to unmask]> FSL - FMRIB's
> Software Library <[log in to unmask]> writes:
> > Dear FSL,
> > can anyone advise me how i might update the symbolic links to the highres
> > contained within the /reg directory. The reason is i've moved a Feat
> > from another machine and rather than re-run the registration i thought it
> > be easier just to tell it where to find the highres image on this machine.
> > Many thanks,
> > Donna
> > Donna Lloyd DPhil
> > Magnetic Resonance and Image
> > Analysis Research Centre (MARIARC)
> > University of Liverpool
> > 2 Abercromby Square
> > Liverpool, U.K.
> > L69 3BX
> > Tel No: +44-151-794-5629
> > Fax No: +44-151-794-5635
> > or
> > Pain Research Institute
> > Clinical Sciences Centre
> > University Hospital Aintree
> > Lower Lane
> > Liverpool, U.K.
> > L9 7AL
> > Tel No: +44-151-529-5845
> > Fax No: +44-151-529-5821
> Jonathan Brooks (Ph.D.) Research Assistant
> Pain Group, Department of Human Anatomy & Genetics
> University of Oxford, South Parks Road, Oxford, OX1 3QX
> tel: 01865 272156 fax: 01865 282675
Donna Lloyd DPhil
Magnetic Resonance and Image
Analysis Research Centre (MARIARC)
University of Liverpool
2 Abercromby Square
Tel No: +44-151-794-5629
Fax No: +44-151-794-5635
Pain Research Institute
Clinical Sciences Centre
University Hospital Aintree
Tel No: +44-151-529-5845
Fax No: +44-151-529-5821