Thanks Tim! Another reason to dislike Windows!
Cheers
Dave
Tim Behrens wrote:
>Hiya -
>This is my fault for writing such sensitive code I guess!
>
>You need to remove the Microsoft Windows carriage returns (^M) from the
>end of the lines in your bvecs file and add a proper UNIX carriage return
>at the end of your bvals file
>
>Then everything works ok
>
>
>as an aside. It looks like your x-dimension is defined opposite to the FSL
>one - we use radiological coordinates by default, so left is right!! This
>means that if your bvecs are defined in neurological coords, then you will
>have to multiply the "x" elememnts by -1. On first inspection, it looks
>like this is the case.
>
>
>Hope this is useful
>
>Tim
>
>
>
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