Hi - I presume that it's the x.amt transform - but you can just try using
it to be sure and look at the results - which is always a good thing to do
anyway!
The ApplyXFM (or ApplyXFM_gui) GUI will let you try applying a transform
to see.
Cheers.
On Fri, 5 Nov 2004, Stamatis Sotiropoulos wrote:
> Hi all,
> I am using FLIRT to register a DTI image (Low res) to an MNI template (reference image). I am
> using FLIRT's option "Low res->High res-> Reference image", in which the high res is a structural
> image.
> The result of the procedure is 3 .mat files, i.e 3 transformation matrices. One file has the same
> name with the input DTI file (if x.hdr, then x.mat is the first mat file) and the other two are named
> x1.mat and x2.mat. I want to know the transformation matrix that does the overall transformation
> from DTI to the template image. Which one of the files contain this matrix?
>
> Thanks,
> Stamatis
>
Stephen M. Smith DPhil
Associate Director, FMRIB and Analysis Research Coordinator
Oxford University Centre for Functional MRI of the Brain
John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
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