Thanks Jack, yes, the check for restricted FOV was overwriting the setting
in the design.fsf on loading. If you unpack the following two files into
fsl/tcl that should fix this.
http://www.fmrib.ox.ac.uk/~steve/ftp/featpatch.tar.gz
Cheers, Steve.
On Sat, 30 Oct 2004, Jack Grinband wrote:
> Hi All,
> When I load a design.fsf file into the FEAT gui, the registration parameters default to 7DOF,
> 12DOF, and 12DOF, despite the fact that the design.fsf says this:
>
> # Degrees of Freedom for registration to initial structural
> set fmri(reginitial_highres_dof) 6
>
> # Degrees of Freedom for registration to main structural
> set fmri(reghighres_dof) 6
>
> # Degrees of Freedom for registration to standard space
> set fmri(regstandard_dof) 12
>
>
> Is this a bug?
>
> I would like to set the default values for FEAT to be 6, 6, and 12 DOF. I took the following lines in
> feat.tcl :
>
> proc feat5:updatereg { w } {
> global fmri
>
> if { $fmri(regreduce_dof) > 0 } {
> set fmri(reginitial_highres_dof) 12
> set fmri(reghighres_dof) 12
> set fmri(regstandard_dof) 12
>
> set thedof 7
> if { $fmri(regreduce_dof) == 2 } {
> set thedof 3
> }
>
>
> and changed them to:
>
> set fmri(reginitial_highres_dof) 6
> set fmri(reghighres_dof) 6
>
>
> but that didn't seem to do anything.
> Any suggestions would be much appreciated. thanks,
>
> jack
>
--
Stephen M. Smith DPhil
Associate Director, FMRIB and Analysis Research Coordinator
Oxford University Centre for Functional MRI of the Brain
John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
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