On 6 Dec 2004, at 00:40, Bettyann Chodkowski wrote:
> Hello all,
> I wish to run MELODIC in batch-mode following the FEAT analysis. Two
> (1) Is there a neat "design.fsf" equivalent for MELODIC?
the standard Melodic_gui does not (yet) have a design.fsf setup option.
You can, however, call melodic directly from the Feat_gui. This will
run melodic on the filtered_func_data - the option is part of the Feat
design.fsf, i.e. you can set it up such that both Feat & melodic are
called from a single design.fsf
> (2) Since I am running MELODIC on the heels of FEAT, in the MELODIC
> gui I:
> (a) [Select 4D data] = filtered_func_data; and
> (b) turn off all [Pre-stats] options
> Is there something else I should do?
yep, that's right - or just run it from the feat gui
> I can look at the tcl code attached to the [Go] button in the MELODIC
> but I thought I would ask before I got too ahead of myself.
> Thank you,
> - bettyann
> BettyAnn Chodkowski F.M. Kirby Center
> e: [log in to unmask] Kennedy Krieger Institute
> v: 443.923.9524 707 N. Broadway
> f: 443.923.9279 Baltimore, MD, USA 21205
Christian F. Beckmann
Oxford University Centre for Functional
Magnetic Resonance Imaging of the Brain,
John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK
Email: [log in to unmask] - http://www.fmrib.ox.ac.uk/~beckmann/
Phone: +44(0)1865 222782 Fax: +44(0)1865 222717