Hi Jason - maybe just use FLIRT to register to the standard space
template? Does that give you what you want? Or did you want to control
this by hand?
Cheers.
On Wed, 12 May 2004, Jason Steffener wrote:
> Hello.
> I have high resolution anatomical images collected in an ''odd''
> orientation. I would like to rotate them relative to the AC-PC plane and
> create new image isn this orientation. Is there any way to determine how
> much to rotate the images and then how to apply the rotations?
> thank you,
> Jason.
>
> Jason Steffener
> Department of Radiology
> New Jersey Medical School
> Biomedical Engineering Department
> New Jersey Institute of Technology
> Newark, NJ USA
> (973) 676-1000 x1545
> http://web.njit.edu/~jrs3
>
Stephen M. Smith DPhil
Associate Director, FMRIB and Analysis Research Coordinator
Oxford University Centre for Functional MRI of the Brain
John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
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