Hi,
Yes, you can, if you like, run most FSL components without using BET
first on 2D slices. Things like segmentation (FAST) won't work well, but
FEAT in general works OK.
Cheers,
Mark
CRUPAIN MICHAEL wrote:
>-----Original Message-----
>From: Stephen Smith [mailto:[log in to unmask]]
>Sent: Wednesday, August 20, 2003 8:12 AM
>To: [log in to unmask]
>Subject: Re: [FSL] Anatomical image format
>
>"For running BET - note that BET is really designed for full 3D datasets.
>There is a cheap kludge in BET to _try_ to work on single slice data, but
>it's not very tested and may not work well. Do you really need to do brain
>extraction on the 2D images?"
>
>Does this mean that its ok to run the rest of the FSL components without
>having first run BET for single slice data?
>
>Thanks,
>Michael
>
>
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