Hi
it appears that melodic is working up until it tries to fit the mixture
model to the final extracted IC map. Is it possible for you to provide a
download link for me to have a look (please don't post several MB to the
list :)
You can also try and run everything from the command line in order to
localise the problem further:
melodic -i indata -v --no_mm
will simply run the ICA estimation without the mixture model
After that
melodic -i indata --ICs=indata.ica/melodic_IC
--mix=indata.ica/melodic_mix -v --report --no_mm
will generate the old-style report (i.e. no mixture model and
unthresholded IC maps only)
Alternatively
melodic -i indata --ICs=indata.ica/melodic_IC
--mix=indata.ica/melodic_mix -v --report
will genarate the new-style report (i.e. using mixture modelling to
obtain p-maps and threshold.
hope this helps
Christian
tulu wrote:
> Dear FSL expert and Christian Beckmann,
> The following are melodic.log and report.log. I can see the result but
> the 00index.html is no function. Besides, the console didn't show
> "finish" when I can see the result in the .ica file.
> Melodic.log
>
> Melodic Version 2.0 beta
>
> /home/tulu/fsl/bin/melodic -i filtered_func_data -o
> /home/tulu/TEST/xnx.ica -v --nobet --bgthreshold=10 --tr=3.0 -d 0
> --mmthresh=0.5 --report --Ostats
> ---------------------------------------------
>
> Melodic results will be in /home/tulu/TEST/xnx.ica
>
> Reading data file filtered_func_data ... done
> Create mask ... done
> Excluding voxels with constant value
> Data size : 50 x 406851
> Removing mean image ... done
> Estimating data covariance ... done
> Perform variance-normalisation ... done
> Removing mean time course ... done
> Starting PCA ... done
> Estimating the number of sources from the data (PPCA) ...
> Calling Smoothest: /home/tulu/fsl/bin/smoothest -d 50 -r
> filtered_func_data -m /home/tulu/TEST/xnx.ica/mask >
> /home/tulu/TEST/xnx.ica/smoothest
> Start whitening using 6 dimensions ...
> retaining 40.8863 percent of the variability
> ... done
>
> Starting ICA estimation using symm
>
> Step no. 1 change : 0.882778
> Step no. 2 change : 0.795288
> Step no. 3 change : 0.81795
> Step no. 4 change : 0.871594
> Step no. 5 change : 0.372949
> Step no. 6 change : 0.834587
> Step no. 7 change : 0.214705
> Step no. 8 change : 0.506175
> Step no. 9 change : 0.912572
> Step no. 10 change : 0.116408
> Step no. 11 change : 0.0803865
> Step no. 12 change : 0.158086
> Step no. 13 change : 0.308133
> Step no. 14 change : 0.564628
> Step no. 15 change : 0.901241
> Step no. 16 change : 0.0875363
> Step no. 17 change : 0.0260057
> Step no. 18 change : 0.0386769
> Step no. 19 change : 0.0763526
> Step no. 20 change : 0.140302
> Step no. 21 change : 0.296846
> Step no. 22 change : 0.525607
> Step no. 23 change : 0.955096
> Step no. 24 change : 0.259621
> Step no. 25 change : 0.609081
> Step no. 26 change : 0.878248
> Step no. 27 change : 0.142299
> Step no. 28 change : 0.391762
> Step no. 29 change : 0.938224
> Step no. 30 change : 0.143245
> Step no. 31 change : 0.259603
> Step no. 32 change : 0.586307
> Step no. 33 change : 0.779575
> Step no. 34 change : 0.0768344
> Step no. 35 change : 0.170307
> Step no. 36 change : 0.401651
> Step no. 37 change : 0.771361
> Step no. 38 change : 0.45907
> Step no. 39 change : 0.160585
> Step no. 40 change : 0.43443
> Step no. 41 change : 0.979293
> Step no. 42 change : 0.202279
> Step no. 43 change : 0.505334
> Step no. 44 change : 0.979093
> Step no. 45 change : 0.092473
> Step no. 46 change : 0.0134716
> Step no. 47 change : 0.0132205
> Step no. 48 change : 0.0252373
> Step no. 49 change : 0.0567959
> Step no. 50 change : 0.163878
> Step no. 51 change : 0.378325
> Step no. 52 change : 0.861876
> Step no. 53 change : 0.989962
> Step no. 54 change : 0.229353
> Step no. 55 change : 0.292372
> Step no. 56 change : 0.584815
> Step no. 57 change : 0.879325
> Step no. 58 change : 0.0712915
> Step no. 59 change : 0.0949321
> Step no. 60 change : 0.207175
> Step no. 61 change : 0.406287
> Step no. 62 change : 0.712126
> Step no. 63 change : 0.637178
> Step no. 64 change : 0.33515
> Step no. 65 change : 0.678854
> Step no. 66 change : 0.492451
> Step no. 67 change : 0.788931
> Step no. 68 change : 0.294502
> Step no. 69 change : 0.732219
> Step no. 70 change : 0.657456
> Step no. 71 change : 0.591069
> Step no. 72 change : 0.185144
> Step no. 73 change : 0.437729
> Step no. 74 change : 0.997739
> Step no. 75 change : 0.153969
> Step no. 76 change : 0.196673
> Step no. 77 change : 0.412299
> Step no. 78 change : 0.929882
> Step no. 79 change : 0.497508
> Step no. 80 change : 0.721792
> Step no. 81 change : 0.112318
> Step no. 82 change : 0.362526
> Step no. 83 change : 0.885332
> Step no. 84 change : 0.499098
> Step no. 85 change : 0.596747
> Step no. 86 change : 0.26553
> Step no. 87 change : 0.788434
> Step no. 88 change : 0.389031
> Step no. 89 change : 0.0766011
> Step no. 90 change : 0.221383
> Step no. 91 change : 0.446554
> Step no. 92 change : 0.896754
> Step no. 93 change : 0.293469
> Step no. 94 change : 0.848541
> Step no. 95 change : 0.0476908
> Step no. 96 change : 0.154559
> Step no. 97 change : 0.365985
> Step no. 98 change : 0.693019
> Step no. 99 change : 0.660341
> Step no. 100 change : 0.451218
> Step no. 101 change : 0.996268
> Step no. 102 change : 0.0378014
> Step no. 103 change : 0.0231304
> Step no. 104 change : 0.0171864
> Step no. 105 change : 0.0155642
> Step no. 106 change : 0.0133469
> Step no. 107 change : 0.0167252
> Step no. 108 change : 0.020833
> Step no. 109 change : 0.0380994
> Step no. 110 change : 0.0725206
> Step no. 111 change : 0.150153
> Step no. 112 change : 0.286337
> Step no. 113 change : 0.559159
> Step no. 114 change : 0.435167
> Step no. 115 change : 0.812175
> Step no. 116 change : 0.733224
> Step no. 117 change : 0.376222
> Step no. 118 change : 0.376002
> Step no. 119 change : 0.619248
> Step no. 120 change : 0.99243
> Step no. 121 change : 0.0922127
> Step no. 122 change : 0.0245183
> Step no. 123 change : 0.101709
> Step no. 124 change : 0.255524
> Step no. 125 change : 0.688268
> Step no. 126 change : 0.612205
> Step no. 127 change : 0.945893
> Step no. 128 change : 0.254278
> Step no. 129 change : 0.936084
> Step no. 130 change : 0.209125
> Step no. 131 change : 0.245017
> Step no. 132 change : 0.339683
> Step no. 133 change : 0.688547
> Step no. 134 change : 0.706988
> Step no. 135 change : 0.19855
> Step no. 136 change : 0.196327
> Step no. 137 change : 0.209534
> Step no. 138 change : 0.380784
> Step no. 139 change : 0.793212
> Step no. 140 change : 0.676372
> Step no. 141 change : 0.540661
> Step no. 142 change : 0.269003
> Step no. 143 change : 0.586595
> Step no. 144 change : 0.755544
> Step no. 145 change : 0.160425
> Step no. 146 change : 0.256619
> Step no. 147 change : 0.608466
> Step no. 148 change : 0.898943
> Step no. 149 change : 0.117638
> Step no. 150 change : 0.35202
> Step no. 151 change : 0.975283
> Step no. 152 change : 0.0945643
> Step no. 153 change : 0.145913
> Step no. 154 change : 0.354323
> Step no. 155 change : 0.76209
> Step no. 156 change : 0.699131
> Step no. 157 change : 0.38509
> Step no. 158 change : 0.726286
> Step no. 159 change : 0.43515
> Step no. 160 change : 0.939405
> Step no. 161 change : 0.0908312
> Step no. 162 change : 0.15019
> Step no. 163 change : 0.341153
> Step no. 164 change : 0.701415
> Step no. 165 change : 0.889407
> Step no. 166 change : 0.122799
> Step no. 167 change : 0.338462
> Step no. 168 change : 0.986402
> Step no. 169 change : 0.106405
> Step no. 170 change : 0.0509691
> Step no. 171 change : 0.0326041
> Step no. 172 change : 0.0307809
> Step no. 173 change : 0.0296455
> Step no. 174 change : 0.0398088
> Step no. 175 change : 0.0534132
> Step no. 176 change : 0.0811957
> Step no. 177 change : 0.112949
> Step no. 178 change : 0.176606
> Step no. 179 change : 0.252027
> Step no. 180 change : 0.405994
> Step no. 181 change : 0.604559
> Step no. 182 change : 0.953195
> Step no. 183 change : 0.675642
> Step no. 184 change : 0.803064
> Step no. 185 change : 0.127307
> Step no. 186 change : 0.0886309
> Step no. 187 change : 0.0577911
> Step no. 188 change : 0.0625675
> Step no. 189 change : 0.063798
> Step no. 190 change : 0.0789831
> Step no. 191 change : 0.103001
> Step no. 192 change : 0.136557
> Step no. 193 change : 0.201149
> Step no. 194 change : 0.278575
> Step no. 195 change : 0.442172
> Step no. 196 change : 0.646812
> Step no. 197 change : 0.983523
> Step no. 198 change : 0.912123
> Step no. 199 change : 0.465209
> Step no. 200 change : 0.650447
> Step no. 201 change : 0.911499
> Step no. 202 change : 0.986689
> Step no. 203 change : 0.632851
> Step no. 204 change : 0.926282
> Step no. 205 change : 0.451335
> Step no. 206 change : 0.247574
> Step no. 207 change : 0.175066
> Step no. 208 change : 0.215587
> Step no. 209 change : 0.340059
> Step no. 210 change : 0.551781
> Step no. 211 change : 0.883979
> Step no. 212 change : 0.611525
> Step no. 213 change : 0.264552
> Step no. 214 change : 0.282083
> Step no. 215 change : 0.476365
> Step no. 216 change : 0.842096
> Step no. 217 change : 0.444422
> Step no. 218 change : 0.900626
> Step no. 219 change : 0.150803
> Step no. 220 change : 0.175259
> Step no. 221 change : 0.286651
> Step no. 222 change : 0.487351
> Step no. 223 change : 0.912181
> Step no. 224 change : 0.561787
> Step no. 225 change : 0.756387
> Step no. 226 change : 0.0678986
> Step no. 227 change : 0.0593598
> Step no. 228 change : 0.0806576
> Step no. 229 change : 0.137377
> Step no. 230 change : 0.229786
> Step no. 231 change : 0.354524
> Step no. 232 change : 0.604098
> Step no. 233 change : 0.93012
> Step no. 234 change : 0.449401
> Step no. 235 change : 0.753024
> Step no. 236 change : 0.313845
> Step no. 237 change : 0.508664
> Step no. 238 change : 0.915449
> Step no. 239 change : 0.0959035
> Step no. 240 change : 0.0432905
> Step no. 241 change : 0.0479417
> Step no. 242 change : 0.0833722
> Step no. 243 change : 0.144621
> Step no. 244 change : 0.305701
> Step no. 245 change : 0.54139
> Step no. 246 change : 0.993382
> Step no. 247 change : 0.184876
> Step no. 248 change : 0.384379
> Step no. 249 change : 0.808186
> Step no. 250 change : 0.354844
> Step no. 251 change : 0.859612
> Step no. 252 change : 0.15063
> Step no. 253 change : 0.279533
> Step no. 254 change : 0.629158
> Step no. 255 change : 0.864012
> Step no. 256 change : 0.0940818
> Step no. 257 change : 0.220283
> Step no. 258 change : 0.645443
> Step no. 259 change : 0.433274
> Step no. 260 change : 0.801154
> Step no. 261 change : 0.248528
> Step no. 262 change : 0.667847
> Step no. 263 change : 0.402848
> Step no. 264 change : 0.73402
> Step no. 265 change : 0.375587
> Step no. 266 change : 0.944956
> Step no. 267 change : 0.0771324
> Step no. 268 change : 0.0461628
> Step no. 269 change : 0.0405837
> Step no. 270 change : 0.056007
> Step no. 271 change : 0.0922095
> Step no. 272 change : 0.156195
> Step no. 273 change : 0.243945
> Step no. 274 change : 0.424425
> Step no. 275 change : 0.643843
> Step no. 276 change : 0.963448
> Step no. 277 change : 0.933923
> Step no. 278 change : 0.846957
> Step no. 279 change : 0.458251
> Step no. 280 change : 0.138731
> Step no. 281 change : 0.11635
> Step no. 282 change : 0.122873
> Step no. 283 change : 0.145869
> Step no. 284 change : 0.205915
> Step no. 285 change : 0.323275
> Step no. 286 change : 0.535578
> Step no. 287 change : 0.849767
> Step no. 288 change : 0.79239
> Step no. 289 change : 0.516877
> Step no. 290 change : 0.662189
> Step no. 291 change : 0.660174
> Step no. 292 change : 0.471235
> Step no. 293 change : 0.792498
> Step no. 294 change : 0.101628
> Step no. 295 change : 0.120833
> Step no. 296 change : 0.381282
> Step no. 297 change : 0.920827
> Step no. 298 change : 0.195081
> Step no. 299 change : 0.465165
> Step no. 300 change : 0.979631
> Step no. 301 change : 0.0850283
> Step no. 302 change : 0.0195836
> Step no. 303 change : 0.0828691
> Step no. 304 change : 0.261054
> Step no. 305 change : 0.773883
> Step no. 306 change : 0.280047
> Step no. 307 change : 0.977358
> Step no. 308 change : 0.166707
> Step no. 309 change : 0.727992
> Step no. 310 change : 0.179691
> Step no. 311 change : 0.546451
> Step no. 312 change : 0.938621
> Step no. 313 change : 0.103121
> Step no. 314 change : 0.21555
> Step no. 315 change : 0.51799
> Step no. 316 change : 0.841311
> Step no. 317 change : 0.0854611
> Step no. 318 change : 0.063257
> Step no. 319 change : 0.0616056
> Step no. 320 change : 0.0642239
> Step no. 321 change : 0.0608607
> Step no. 322 change : 0.0647082
> Step no. 323 change : 0.062038
> Step no. 324 change : 0.0695007
> Step no. 325 change : 0.126094
> Step no. 326 change : 0.247826
> Step no. 327 change : 0.425374
> Step no. 328 change : 0.826588
> Step no. 329 change : 0.719156
> Step no. 330 change : 0.224584
> Step no. 331 change : 0.576914
> Step no. 332 change : 0.51154
> Step no. 333 change : 0.932244
> Step no. 334 change : 0.0666215
> Step no. 335 change : 0.0521623
> Step no. 336 change : 0.133409
> Step no. 337 change : 0.436133
> Step no. 338 change : 0.977073
> Step no. 339 change : 0.08264
> Step no. 340 change : 0.0598174
> Step no. 341 change : 0.126208
> Step no. 342 change : 0.230972
> Step no. 343 change : 0.401274
> Step no. 344 change : 0.76555
> Step no. 345 change : 0.869927
> Step no. 346 change : 0.159219
> Step no. 347 change : 0.497979
> Step no. 348 change : 0.662151
> Step no. 349 change : 0.490413
> Step no. 350 change : 0.764552
> Step no. 351 change : 0.083926
> Step no. 352 change : 0.0997725
> Step no. 353 change : 0.213066
> Step no. 354 change : 0.416484
> Step no. 355 change : 0.945318
> Step no. 356 change : 0.448
> Step no. 357 change : 0.802786
> Step no. 358 change : 0.0593989
> Step no. 359 change : 0.0996306
> Step no. 360 change : 0.239274
> Step no. 361 change : 0.481926
> Step no. 362 change : 0.965056
> Step no. 363 change : 0.211581
> Step no. 364 change : 0.566268
> Step no. 365 change : 0.882917
> Step no. 366 change : 0.154615
> Step no. 367 change : 0.556711
> Step no. 368 change : 0.498548
> Step no. 369 change : 0.864903
> Step no. 370 change : 0.054375
> Step no. 371 change : 0.0558827
> Step no. 372 change : 0.175256
> Step no. 373 change : 0.52786
> Step no. 374 change : 0.641068
> Step no. 375 change : 0.708264
> Step no. 376 change : 0.244396
> Step no. 377 change : 0.884608
> Step no. 378 change : 0.0413846
> Step no. 379 change : 0.0838932
> Step no. 380 change : 0.197779
> Step no. 381 change : 0.38997
> Step no. 382 change : 0.864104
> Step no. 383 change : 0.607075
> Step no. 384 change : 0.405995
> Step no. 385 change : 0.841485
> Step no. 386 change : 0.230665
> Step no. 387 change : 0.569439
> Step no. 388 change : 0.878846
> Step no. 389 change : 0.157672
> Step no. 390 change : 0.570891
> Step no. 391 change : 0.457421
> Step no. 392 change : 0.961396
> Step no. 393 change : 0.0447745
> Step no. 394 change : 0.00785339
> Step no. 395 change : 0.0050555
> Step no. 396 change : 0.0082379
> Step no. 397 change : 0.0144205
> Step no. 398 change : 0.0531151
> Step no. 399 change : 0.132139
> Step no. 400 change : 0.354
> Step no. 401 change : 0.733643
> Step no. 402 change : 0.683222
> Step no. 403 change : 0.22777
> Step no. 404 change : 0.116822
> Step no. 405 change : 0.0490577
> Step no. 406 change : 0.0710959
> Step no. 407 change : 0.114939
> Step no. 408 change : 0.283331
> Step no. 409 change : 0.531221
> Step no. 410 change : 0.95787
> Step no. 411 change : 0.905173
> Step no. 412 change : 0.464121
> Step no. 413 change : 0.168333
> Step no. 414 change : 0.144223
> Step no. 415 change : 0.146378
> Step no. 416 change : 0.245084
> Step no. 417 change : 0.445308
> Step no. 418 change : 0.767658
> Step no. 419 change : 0.697567
> Step no. 420 change : 0.950852
> Step no. 421 change : 0.682301
> Step no. 422 change : 0.910552
> Step no. 423 change : 0.954357
> Step no. 424 change : 0.679389
> Step no. 425 change : 0.685718
> Step no. 426 change : 0.651906
> Step no. 427 change : 0.915321
> Step no. 428 change : 0.102474
> Step no. 429 change : 0.0927557
> Step no. 430 change : 0.317439
> Step no. 431 change : 0.711943
> Step no. 432 change : 0.890568
> Step no. 433 change : 0.101153
> Step no. 434 change : 0.133179
> Step no. 435 change : 0.474377
> Step no. 436 change : 0.666566
> Step no. 437 change : 0.356424
> Step no. 438 change : 0.919559
> Step no. 439 change : 0.262236
> Step no. 440 change : 0.70774
> Step no. 441 change : 0.853172
> Step no. 442 change : 0.0985532
> Step no. 443 change : 0.195852
> Step no. 444 change : 0.687235
> Step no. 445 change : 0.240711
> Step no. 446 change : 0.836462
> Step no. 447 change : 0.340744
> Step no. 448 change : 0.797555
> Step no. 449 change : 0.286042
> Step no. 450 change : 0.702769
> Step no. 451 change : 0.802081
> Step no. 452 change : 0.163263
> Step no. 453 change : 0.453186
> Step no. 454 change : 0.706045
> Step no. 455 change : 0.512294
> Step no. 456 change : 0.72775
> Step no. 457 change : 0.0777243
> Step no. 458 change : 0.12389
> Step no. 459 change : 0.250474
> Step no. 460 change : 0.489867
> Step no. 461 change : 0.964972
> Step no. 462 change : 0.264006
> Step no. 463 change : 0.597293
> Step no. 464 change : 0.953964
> Step no. 465 change : 0.0651183
> Step no. 466 change : 0.0712945
> Step no. 467 change : 0.221917
> Step no. 468 change : 0.744756
> Step no. 469 change : 0.230312
> Step no. 470 change : 0.79851
> Step no. 471 change : 0.453393
> Step no. 472 change : 0.483688
> Step no. 473 change : 0.881599
> Step no. 474 change : 0.0897964
> Step no. 475 change : 0.271999
> Step no. 476 change : 0.817973
> Step no. 477 change : 0.126881
> Step no. 478 change : 0.199905
> Step no. 479 change : 0.407286
> Step no. 480 change : 0.748243
> Step no. 481 change : 0.504674
> Step no. 482 change : 0.816729
> Step no. 483 change : 0.197476
> Step no. 484 change : 0.485318
> Step no. 485 change : 0.948416
> Step no. 486 change : 0.0744194
> Step no. 487 change : 0.00843682
> Step no. 488 change : 0.0114631
> Step no. 489 change : 0.053309
> Step no. 490 change : 0.143602
> Step no. 491 change : 0.415823
> Step no. 492 change : 0.915229
> Step no. 493 change : 0.301684
> Step no. 494 change : 0.323373
> Step no. 495 change : 0.552361
> Step no. 496 change : 0.967581
> Step no. 497 change : 0.0935518
> Step no. 498 change : 0.0693095
> Step no. 499 change : 0.296258
>
> Restarting MELODIC using -d 9
>
> Starting PCA ... done
> Start whitening using 9 dimensions ...
> retaining 50.0853 percent of the variability
> ... done
>
> Starting ICA estimation using symm
>
> Step no. 1 change : 0.979455
> Step no. 2 change : 0.722152
> Step no. 3 change : 0.945463
> Step no. 4 change : 0.808682
> Step no. 5 change : 0.574701
> Step no. 6 change : 0.834175
> Step no. 7 change : 0.234106
> Step no. 8 change : 0.324653
> Step no. 9 change : 0.660091
> Step no. 10 change : 0.690118
> Step no. 11 change : 0.164494
> Step no. 12 change : 0.267847
> Step no. 13 change : 0.699784
> Step no. 14 change : 0.949069
> Step no. 15 change : 0.222615
> Step no. 16 change : 0.0664288
> Step no. 17 change : 0.0799595
> Step no. 18 change : 0.0845491
> Step no. 19 change : 0.13663
> Step no. 20 change : 0.181156
> Step no. 21 change : 0.263399
> Step no. 22 change : 0.337235
> Step no. 23 change : 0.459273
> Step no. 24 change : 0.642509
> Step no. 25 change : 0.917804
> Step no. 26 change : 0.810319
> Step no. 27 change : 0.202456
> Step no. 28 change : 0.830189
> Step no. 29 change : 0.633573
> Step no. 30 change : 0.135606
> Step no. 31 change : 0.0500708
> Step no. 32 change : 0.052351
> Step no. 33 change : 0.0809958
> Step no. 34 change : 0.131846
> Step no. 35 change : 0.216438
> Step no. 36 change : 0.30952
> Step no. 37 change : 0.430573
> Step no. 38 change : 0.540978
> Step no. 39 change : 0.681716
> Step no. 40 change : 0.822758
> Step no. 41 change : 0.983985
> Step no. 42 change : 0.958433
> Step no. 43 change : 0.484864
> Step no. 44 change : 0.105081
> Step no. 45 change : 0.0812146
> Step no. 46 change : 0.101977
> Step no. 47 change : 0.1412
> Step no. 48 change : 0.173188
> Step no. 49 change : 0.205771
> Step no. 50 change : 0.205985
> Step no. 51 change : 0.211599
> Step no. 52 change : 0.18584
> Step no. 53 change : 0.172097
> Step no. 54 change : 0.140014
> Step no. 55 change : 0.120278
> Step no. 56 change : 0.0934923
> Step no. 57 change : 0.0762947
> Step no. 58 change : 0.0576906
> Step no. 59 change : 0.0456382
> Step no. 60 change : 0.0339836
> Step no. 61 change : 0.0264568
> Step no. 62 change : 0.0195739
> Step no. 63 change : 0.015145
> Step no. 64 change : 0.0112027
> Step no. 65 change : 0.00866537
> Step no. 66 change : 0.00643419
> Step no. 67 change : 0.00499128
> Step no. 68 change : 0.00372851
> Step no. 69 change : 0.00290506
> Step no. 70 change : 0.0021853
> Step no. 71 change : 0.00171096
> Step no. 72 change : 0.00129626
> Step no. 73 change : 0.00101976
> Step no. 74 change : 0.000777877
> Step no. 75 change : 0.000614659
> Step no. 76 change : 0.000471828
> Step no. 77 change : 0.000374298
> Step no. 78 change : 0.000288967
> Step no. 79 change : 0.000230474
> Step no. 80 change : 0.000187096
> Step no. 81 change : 0.000153392
> Step no. 82 change : 0.000124419
> Step no. 83 change : 0.000102007
> Step no. 84 change : 8.27163e-05
> Step no. 85 change : 6.78227e-05
> Step no. 86 change : 5.50041e-05
> Step no. 87 change : 4.51085e-05
> Convergence after 87 steps
>
> Writing results to :
> /home/tulu/TEST/xnx.ica/melodic_IC
> /home/tulu/TEST/xnx.ica/melodic_mix
> /home/tulu/TEST/xnx.ica/melodic_FTmix
> /home/tulu/TEST/xnx.ica/mask
>
> Running Mixture Modelling on Z-transformed IC maps ...
> IC map 1 ...
> thresholding ...
> alternative hypothesis test at p > 0.5
> creating report page ... done
> IC map 2 ...
> thresholding ...
> alternative hypothesis test at p > 0.5
> creating report page ... done
> IC map 3 ...
> thresholding ...
> alternative hypothesis test at p > 0.5
> creating report page ... done
> IC map 4 ...
> thresholding ...
> alternative hypothesis test at p > 0.5
> creating report page ... done
> IC map 5 ...
> thresholding ...
> alternative hypothesis test at p > 0.5
> creating report page ... done
> IC map 6 ...
> thresholding ...
> alternative hypothesis test at p > 0.5
> creating report page ... done
> IC map 7 ...
> thresholding ...
> alternative hypothesis test at p > 0.5
> creating report page ... done
> IC map 8 ...
> thresholding ...
> alternative hypothesis test at p > 0.5
> creating report page ... done
> IC map 9 ...
>
> Report.log
> /home/tulu/fsl/bin/avwroi /home/tulu/TEST/xnx example_func 25 1
>
> /home/tulu/fsl/bin/mcflirt -in /home/tulu/TEST/xnx -out
> prefiltered_func_data_mcf -refvol 25
>
> /home/tulu/fsl/bin/betfunc prefiltered_func_data_mcf
> prefiltered_func_data_bet
>
> /home/tulu/fsl/bin/ip prefiltered_func_data_bet filtered_func_data 10 -s
> 3.39702760085 -t 16.6666666667 -1
> THRESHOLD 12.902400
> rm -rf prefiltered_func_data*
>
> /home/tulu/fsl/bin/melodic -i filtered_func_data -o
> /home/tulu/TEST/xnx.ica -v --nobet --bgthreshold=10 --tr=3.0 -d 0
> --mmthresh="0.5" --report --Ostats
> Thank for your help.
> JLH
>
> -----Original Message-----
> From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On
> Behalf Of Christian Beckmann
> Sent: Saturday, October 12, 2002 1:35 AM
> To: [log in to unmask]
> Subject: Re: [FSL] MELDIC problem
>
> Hi
>
> can you plese provide the report.log and melodic.log files from the .ica
> folder - they should give some indication of what went wrong. You can
> also try running it from the command line
>
> melodic -i filename -v --report
>
> cheers
> Christian
>
> Jung Lung Hsu wrote:
>
>>Dear FSL expert,
>>I just use the MELDIC from the new version of FSL (FSL v3.0). I input
>
> the
>
>>4d analyze image which includes 50 subjects. The image diamension of
>
> each
>
>>subject is 79*95*68. After I click the go button I wait for about more
>>than 6 hours but the Konsole did not show "finish" word. Besides, the
>
> exit
>
>>button did not function at that time. I use the P4 and 512 RAM, redhat
>>7.3. The report also have the problem. The 00index.html only have
>>the "Component" word and no other number follows. Is any one can tell
>
> me
>
>>what is wrong ? How to correct it ? ( I pass the test of example data)
>>Thanks
>>JLH
>>
>>
>
>
>
> --
> Christian F. Beckmann
> Address: Oxford University Centre for Functional
> Magnetic Resonance Imaging of the Brain,
> John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK
> Email: [log in to unmask] http://www.fmrib.ox.ac.uk/~beckmann/
> Phone: +44(0)1865 222782 Fax: +44(0)1865 222717 Mob: +44(0)7811
> 189123
>
>
--
Christian F. Beckmann
Address: Oxford University Centre for Functional
Magnetic Resonance Imaging of the Brain,
John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK
Email: [log in to unmask] http://www.fmrib.ox.ac.uk/~beckmann/
Phone: +44(0)1865 222782 Fax: +44(0)1865 222717 Mob: +44(0)7811 189123
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