We would like to extract signal values from each individual MD map.
We ran TBSS_non_FA with MD images but we are not certain that we are getting the files that we need. We would like to get MD files that have been aligned to a target. For the FA files, these seem to be save as *FA_to_Target. Are similar files saved for non FA images when running TBSS_non_FA? If not, is there a way to save these files?
Thank you for your help!