JiscMail Logo
Email discussion lists for the UK Education and Research communities

Help for CCPEM Archives


CCPEM Archives

CCPEM Archives


May 2019


View:

Show Author | Hide Author

LISTSERV Archives

LISTSERV Archives

CCPEM Home

CCPEM Home

Options

Subscribe or Unsubscribe

Subscribe or Unsubscribe

Log In

Log In

Get Password

Get Password

Subject

From

Date Sorted by Date, Most Recent First

Size

Re: Threadripper Workstation Build Stability Issues

Adrian Koh

Fri, 31 May 2019 19:45:33 +0200

188 lines

Re: question about preferred orientation

Dmitry Lyumkis

Fri, 31 May 2019 14:15:49 +0000

240 lines

Microscopy and image analysis Technician

Daum, Bertram

Fri, 31 May 2019 13:27:24 +0000

120 lines

Re: Threadripper Workstation Build Stability Issues

Alpay Burak Seven

Fri, 31 May 2019 03:36:44 -0700

146 lines

Crick EM Symposium: Focus on Correlative Imaging Across Scales- Early Registration Deadline -

Raffaella Carzaniga

Fri, 31 May 2019 07:40:03 +0000

283 lines

Re: Threadripper Workstation Build Stability Issues

Daniel Asarnow

Thu, 30 May 2019 22:39:29 -0700

112 lines

Re: Threadripper Workstation Build Stability Issues

Matthew Belousoff

Fri, 31 May 2019 14:50:02 +1000

869 lines

Re: Threadripper Workstation Build Stability Issues

Yehuda Halfon

Fri, 31 May 2019 04:22:39 +0000

698 lines

Re: Threadripper Workstation Build Stability Issues

Abhiram Chintangal

Thu, 30 May 2019 21:19:19 -0700

487 lines

Re: Threadripper Workstation Build Stability Issues

Paul Emsley

Fri, 31 May 2019 04:13:11 +0100

150 lines

Re: Threadripper Workstation Build Stability Issues

Bharat Reddy

Thu, 30 May 2019 22:11:53 -0500

528 lines

Re: question about preferred orientation

Sepideh Valimehr

Thu, 30 May 2019 23:11:15 +0000

214 lines

Re: Threadripper Workstation Build Stability Issues

Craig Yoshioka

Thu, 30 May 2019 21:23:56 +0000

299 lines

Re: Threadripper Workstation Build Stability Issues

Yehuda Halfon

Thu, 30 May 2019 21:18:52 +0000

418 lines

Re: Threadripper Workstation Build Stability Issues

Abhiram Chintangal

Thu, 30 May 2019 14:14:29 -0700

365 lines

Re: Threadripper Workstation Build Stability Issues

Abhiram Chintangal

Thu, 30 May 2019 14:09:56 -0700

279 lines

Re: Threadripper Workstation Build Stability Issues

Quyen Hoang

Thu, 30 May 2019 17:05:11 -0400

270 lines

Postdoctoral Position available at the Ohio State University

krish

Thu, 30 May 2019 17:00:16 -0400

127 lines

Re: Threadripper Workstation Build Stability Issues

Yehuda Halfon

Thu, 30 May 2019 20:52:20 +0000

312 lines

Re: Threadripper Workstation Build Stability Issues

Abhiram Chintangal

Thu, 30 May 2019 13:39:48 -0700

177 lines

Re: Threadripper Workstation Build Stability Issues

Dr. Clara Cai

Thu, 30 May 2019 13:22:25 -0700

117 lines

Re: Euler Angle convention in Relion

Takanori Nakane

Thu, 30 May 2019 21:15:34 +0100

52 lines

Threadripper Workstation Build Stability Issues

Abhiram Chintangal

Thu, 30 May 2019 11:48:22 -0700

77 lines

Re: Euler Angle convention in Relion

Yanyan Zhao

Thu, 30 May 2019 19:25:56 +0100

202 lines

Euler Angle convention in Relion

Yanyan Zhao

Thu, 30 May 2019 19:11:31 +0100

195 lines

Re: question about preferred orientation

Qayyum, Mohammad Zuhaib

Thu, 30 May 2019 17:52:16 +0000

172 lines

question about preferred orientation

Mohamed A Sayed

Thu, 30 May 2019 17:26:23 +0000

133 lines

Registration closing soon: "Macromolecules in Action" International Symposium on Integrated biology!

Eaazhisai KANDIAH

Thu, 30 May 2019 09:33:49 +0200

5635 lines

Basic Question about resolution

Hamidreza Rahmani

Thu, 30 May 2019 01:06:30 +0000

115 lines

Re: What's the difference between Refmac global vs local refinement?

Colin Palmer - UKRI STFC

Wed, 29 May 2019 14:11:20 +0000

203 lines

Research Scientist posiiton at NYU Langone Health

Rice, William

Wed, 29 May 2019 11:40:51 +0000

307 lines

Automatic 2D class selection with Cinderella

Thorsten Wagner

Wed, 29 May 2019 11:23:28 +0000

158 lines

Postdoc vacancy in cryo-EM of Gene Regulatory Complexes at Schalch Lab, University of Leicester

Schalch, Thomas (Dr.)

Wed, 29 May 2019 08:44:43 +0000

260 lines

Scientific Data Curator position (PDB and EMDB)

David Armstrong

Wed, 29 May 2019 09:24:09 +0100

42 lines

Postdoctoral position at SUNY Stony Brook University

Saikat Chowdhury

Tue, 28 May 2019 20:19:34 -0400

85 lines

Re: making class averages without alignment or classification

Joseph Atherton

Tue, 28 May 2019 15:54:54 +0100

52 lines

Re: making class averages without alignment or classification

Daniel Larsson

Tue, 28 May 2019 13:36:06 +0000

40 lines

making class averages without alignment or classification

Joe Atherton

Tue, 28 May 2019 12:56:15 +0100

27 lines

biological reference sample for method development

Schulz, Eike-Christian

Tue, 28 May 2019 11:33:30 +0000

275 lines

What's the difference between Refmac global vs local refinement?

Ahmad Khalifa

Sun, 26 May 2019 04:17:28 -0400

37 lines

Re: Script for a posteriori orientation/shifts correction for helical segments ?

Ambroise Desfosses

Sat, 25 May 2019 15:10:25 +0200

300 lines

relion-3.0.5: Error in textToInteger

Dieter Blaas

Sat, 25 May 2019 06:32:28 +0200

127 lines

postdoc positions - NYC

Amedee des Georges

Fri, 24 May 2019 22:05:12 +0000

143 lines

Re: Script for a posteriori orientation/shifts correction for helical segments ?

Sjors Scheres

Fri, 24 May 2019 19:54:30 +0100

210 lines

Re: Script for a posteriori orientation/shifts correction for helical segments ?

Ambroise Desfosses

Fri, 24 May 2019 17:30:54 +0200

169 lines

Re: order of _rln

Alpay Burak Seven

Fri, 24 May 2019 06:55:16 -0700

568 lines

Re: Solving a multi mer complex through cryoem

Felipe Merino

Fri, 24 May 2019 13:11:42 +0200

230 lines

Solving a multi mer complex through cryoem

khaja faisal tarique

Fri, 24 May 2019 16:16:29 +0530

146 lines

Re: Script for a posteriori orientation/shifts correction for helical segments ?

Sjors Scheres

Fri, 24 May 2019 10:31:53 +0100

161 lines

Re: _rlnTiltAngleLimit and --limit_tilt

Sjors Scheres

Fri, 24 May 2019 10:26:08 +0100

59 lines

Cryo-EM Computational Scientist position at Astex, Cambridge UK

Michael Saur

Fri, 24 May 2019 07:38:16 +0000

189 lines

Re: [3dem] order of _rln

Eric Hanssen

Fri, 24 May 2019 04:31:11 +0000

2973 lines

Re: order of _rln

Takanori Nakane

Fri, 24 May 2019 05:21:38 +0100

222 lines

order of _rln

Eric Hanssen

Fri, 24 May 2019 00:01:02 +0000

1664 lines

Re: RELION implementation of MotionCor2, after binning image must be even

David Michael Belnap

Thu, 23 May 2019 21:38:11 +0000

113 lines

_rlnTiltAngleLimit and --limit_tilt

Thomas Bausewein

Thu, 23 May 2019 19:32:41 +0200

33 lines

Re: RELION implementation of MotionCor2, after binning image must be even

Takanori Nakane

Thu, 23 May 2019 17:45:34 +0100

98 lines

Re: RELION implementation of MotionCor2, after binning image must be even

David Michael Belnap

Thu, 23 May 2019 16:28:17 +0000

75 lines

Re: RELION implementation of MotionCor2, after binning image must be even

Takanori Nakane

Thu, 23 May 2019 17:17:33 +0100

52 lines

RELION implementation of MotionCor2, after binning image must be even

David Belnap

Thu, 23 May 2019 16:51:16 +0100

27 lines

Re: Sub 200kdA proteins Krios/Falcon III - advice sought

Purdy, Michael D (mdp3w)

Thu, 23 May 2019 14:04:08 +0000

41 lines

Re: Problem with extraction of helical segments

Luca Pellegrini

Thu, 23 May 2019 12:42:19 +0100

93 lines

Problem with extraction of helical segments

Luca Pellegrini

Thu, 23 May 2019 12:14:29 +0100

68 lines

Re: Relion 3D classification problem

Takanori Nakane

Thu, 23 May 2019 11:06:25 +0100

54 lines

Relion 3D classification problem

Wim Hagen

Thu, 23 May 2019 10:40:15 +0200

29 lines

CryoEM Application Scientist position at TTP Labtech

Michele Darrow

Wed, 22 May 2019 21:37:32 +0000

859 lines

A Wellcome Trust funded Post-Doc position available in Berger group, University of Bristol, UK

kapil gupta

Wed, 22 May 2019 20:52:40 +0100

310 lines

MotionCorr

Mohamed A Sayed

Wed, 22 May 2019 19:42:34 +0000

9496 lines

Sub 200kdA proteins Krios/Falcon III - advice sought

Amer Alam

Wed, 22 May 2019 19:58:48 +0100

27 lines

Re: huge amount of noise after postprocessing

Takanori Nakane

Wed, 22 May 2019 17:34:50 +0100

63 lines

huge amount of noise after postprocessing

Da Cui

Wed, 22 May 2019 17:28:52 +0100

37 lines

Re: Script for a posteriori orientation/shifts correction for helical segments ?

Ambroise Desfosses

Wed, 22 May 2019 16:47:02 +0200

126 lines

Re: Ribfind error viewing in chimera

David A Farmer

Wed, 22 May 2019 14:26:11 +0100

185 lines

Re: Ribfind error viewing in chimera

Colin Palmer - UKRI STFC

Wed, 22 May 2019 13:07:54 +0000

56 lines

Re: Script for a posteriori orientation/shifts correction for helical segments ?

Takanori Nakane

Wed, 22 May 2019 14:05:25 +0100

90 lines

Ribfind error viewing in chimera

David Farmer

Wed, 22 May 2019 13:25:59 +0100

40 lines

Script for a posteriori orientation/shifts correction for helical segments ?

Ambroise Desfosses

Wed, 22 May 2019 14:02:16 +0200

56 lines

Post-doc positions at Imperial College, London

Low, Harry H

Wed, 22 May 2019 10:33:22 +0000

192 lines

Re: sharpen masked refined map in RELION

Juha Huiskonen

Wed, 22 May 2019 11:49:10 +0300

219 lines

Re: License for MRC Image Processing System

Spencer Bliven

Wed, 22 May 2019 08:25:19 +0200

161 lines

Re: Relion auto-refine error

Takanori Nakane

Tue, 21 May 2019 22:15:00 +0100

64 lines

Relion auto-refine error

Yan Han

Tue, 21 May 2019 22:09:21 +0100

56 lines

Re: sharpen masked refined map in RELION

Takanori Nakane

Tue, 21 May 2019 20:13:13 +0100

79 lines

relion_project wrong output

Chen Sun

Tue, 21 May 2019 18:45:09 +0000

1179 lines

Re: sharpen masked refined map in RELION

Basil Greber

Tue, 21 May 2019 11:40:21 -0700

63 lines

sharpen masked refined map in RELION

Pranav Shah

Tue, 21 May 2019 14:28:09 -0400

2409 lines

Re: License for MRC Image Processing System

Martyn Winn - UKRI STFC

Tue, 21 May 2019 18:15:40 +0000

215 lines

License for MRC Image Processing System

Spencer Bliven

Tue, 21 May 2019 16:22:20 +0200

226 lines

cryo-EM technician position at the University of Sheffield

Julien Bergeron

Tue, 21 May 2019 09:38:37 +0100

78 lines

Re: Refmac NCS constraint matrix unrecognized keyword

Paul Emsley

Mon, 20 May 2019 23:51:45 +0100

32 lines

Refmac NCS constraint matrix unrecognized keyword

Ahmad Khalifa

Mon, 20 May 2019 18:44:59 -0400

323 lines

Re: Parallelizing refmac

Ahmad Khalifa

Sun, 19 May 2019 19:09:01 -0400

70 lines

Re: Parallelizing refmac

Paul Emsley

Sun, 19 May 2019 23:51:22 +0100

27 lines

Parallelizing refmac

Ahmad Khalifa

Sun, 19 May 2019 17:39:43 -0400

40 lines

Re: Display local resolution of the map from relion output

Ambroise Desfosses

Sat, 18 May 2019 23:25:17 +0200

40 lines

Display local resolution of the map from relion output

Yangqi Gu

Sat, 18 May 2019 21:35:15 +0100

25 lines

The CompBioMed Newsletter, Issue No. 7, May 2019

Lumley, Emily

Fri, 17 May 2019 15:47:04 +0000

8167 lines

Re: Error running relion_it.py gui

Takanori Nakane

Thu, 16 May 2019 21:01:11 +0100

74 lines

Re: Error running relion_it.py gui

Takanori Nakane

Thu, 16 May 2019 20:44:31 +0100

50 lines

Error running relion_it.py gui

Kasim Sader

Thu, 16 May 2019 20:39:15 +0100

57 lines

EM Facility Manager University of Minnesota, Hormel Institute

Amer Alam

Thu, 16 May 2019 18:21:10 +0100

36 lines

TWO Electron Microscopists positions at NCI. BACHELOR Level!

Natalia de Val

Thu, 16 May 2019 11:30:20 -0400

106 lines

Scipion 2.0 is out

Pablo Conesa

Thu, 16 May 2019 14:22:35 +0200

335 lines

Re: [3dem] Scipion 2.0 is out and Xmipp 19.04

Carlos Oscar S. Sorzano

Thu, 16 May 2019 13:11:42 +0200

443 lines

Re: 2D classification into a single class with overestimated resolution

Carlos Oscar S. Sorzano

Thu, 16 May 2019 12:32:20 +0200

97 lines

Re: CryoEM Electron Microscopy Scientist - GSK UK

Chun-wa Chung

Thu, 16 May 2019 10:30:05 +0000

230 lines

Re: 2D classification into a single class with overestimated resolution

Sergey Nazarov

Thu, 16 May 2019 12:19:18 +0200

407 lines

Re: 2D classification into a single class with overestimated resolution

Matthew Belousoff

Thu, 16 May 2019 09:57:33 +1000

330 lines

Research Associate position (Fixed Term) at the MRC Mitochondrial Biology Unit, University of Cambridge

Jonathan Ruprecht

Wed, 15 May 2019 14:17:19 +0100

59 lines

CCPBioSim annual conference 2019, 4-6 Sept, Bristol

Martyn Winn - UKRI STFC

Wed, 15 May 2019 07:16:59 +0000

200 lines

Re: 2D classification into a single class with overestimated resolution

Daniel Larsson

Wed, 15 May 2019 06:55:37 +0000

83 lines

Cryo-EM facility team leader position at Duke University

Dr Priyamvada Acharya, Ph.D.

Wed, 15 May 2019 06:37:43 +0000

177 lines

2D classification into a single class with overestimated resolution

Stephan Tetter

Wed, 15 May 2019 07:21:17 +0100

511 lines

Re: MTF for K2 summit operating at 200kv

Gabriel Lander

Tue, 14 May 2019 14:04:31 -0700

75 lines

MTF for K2 summit operating at 200kv

Yangqi Gu

Tue, 14 May 2019 21:42:08 +0100

21 lines

Second workshop on machine learning approaches in high resolution microscopy

Ersoy, Ilker

Tue, 14 May 2019 20:10:44 +0000

149 lines

Re: Locked out of Relion without .relion_lock directory

Russell McFarland

Tue, 14 May 2019 21:03:17 +0100

21 lines

Re: Convert relion helical coordinates to eman box file

BuddySphinx

Tue, 14 May 2019 15:02:17 -0400

184 lines

Re: Locked out of Relion without .relion_lock directory

Takanori Nakane

Tue, 14 May 2019 19:29:17 +0100

73 lines

Re: Locked out of Relion without .relion_lock directory

Ahel,Juraj

Tue, 14 May 2019 18:22:59 +0000

124 lines

Re: Locked out of Relion without .relion_lock directory

Pranav Shah

Tue, 14 May 2019 13:35:26 -0400

58 lines

Locked out of Relion without .relion_lock directory

Russell McFarland

Tue, 14 May 2019 18:13:59 +0100

27 lines

CryoNet Symposium, October 10-11

Vasileios Kyriakidis

Tue, 14 May 2019 14:45:14 +0200

109 lines

Re: Convert relion helical coordinates to eman box file

Ambroise Desfosses

Tue, 14 May 2019 11:40:48 +0200

423 lines

Re: Overloading the power supply while using GPUs

Takanori Nakane

Tue, 14 May 2019 07:51:05 +0100

51 lines

Overloading the power supply while using GPUs

Yehuda Halfon

Tue, 14 May 2019 06:27:08 +0000

81 lines

Convert relion helical coordinates to eman box file

Yangqi Gu

Mon, 13 May 2019 21:35:34 +0100

28 lines

Instruct EM Image processing and hybrid modelling course in Madrid July 8-11, 2019

Carlos Oscar S. Sorzano

Mon, 13 May 2019 14:57:21 +0200

41 lines

protocol multi-body refinement

Sjors Scheres

Mon, 13 May 2019 06:20:12 +0100

36 lines

Full Professorship Position in Biophysics (sent on behalf of Karl Gruber)

Tea Pavkov-Keller

Sun, 12 May 2019 21:03:55 +0100

52 lines

May 14 Webinar on AI For Cryoem Data Selection And Classification

Alex Noble

Fri, 10 May 2019 20:24:24 +0000

215 lines

Postdoctoral position at the ISMB Birkbeck, London

Carolyn Moores

Fri, 10 May 2019 17:07:22 +0100

107 lines

Colloquium in CryoEM for Drug Development, Imperial College London May 29

Bubeck, Doryen A

Fri, 10 May 2019 15:18:31 +0000

143 lines

Re: Expand number of particles based on non-standard symmetry

Takanori Nakane

Fri, 10 May 2019 12:04:14 +0100

49 lines

Expand number of particles based on non-standard symmetry

Angel Rivera-Calzada

Fri, 10 May 2019 09:58:50 +0200

650 lines

Postdoc position available (on behalf of Filippo Mancia)

Oliver Clarke

Fri, 10 May 2019 12:21:14 +1000

64 lines

Re: CtfRefine for tilt data

Min Su

Thu, 9 May 2019 09:15:06 -0400

190 lines

local symmetry

Stefano Trapani

Thu, 9 May 2019 10:22:43 +0200

165 lines

Re: CtfRefine for tilt data

Dmitry Lyumkis

Wed, 8 May 2019 22:39:44 +0000

215 lines

CtfRefine for tilt data

Zhao, Haiyan

Wed, 8 May 2019 22:30:11 +0000

3027 lines

Research Technician – Cryo-Electron Microscopist Dallas, TX

Diana Tomchick

Wed, 8 May 2019 21:04:14 +0000

2775 lines

Re: MTF file for Falcon 3 at 300 kV

Daniel Larsson

Wed, 8 May 2019 11:17:47 +0000

190 lines

Software developer position at PDBe

David Armstrong

Wed, 8 May 2019 09:23:33 +0100

119 lines

Re: Question about an ERROR message while working through the RELION3.0_tutorial...

Takanori Nakane

Tue, 7 May 2019 21:31:33 +0100

87 lines

Question about an ERROR message while working through the RELION3.0_tutorial...

Jones, Charles (NIH/NIDDK) [E]

Tue, 7 May 2019 19:25:36 +0000

155 lines

Re: post-processing K2 tiff frames from SerialEM

Takanori Nakane

Tue, 7 May 2019 13:48:18 +0100

40 lines

Reminder: Birkbeck EMBO course Sept 2-12, 2019

Helen Saibil

Tue, 7 May 2019 12:50:27 +0100

44 lines

post-processing K2 tiff frames from SerialEM

Marta Sawicka

Tue, 7 May 2019 13:38:18 +0200

122 lines

Re: autopocking using laplacian

Takanori Nakane

Tue, 7 May 2019 07:26:12 +0100

71 lines

Re: autopocking using laplacian

Takanori Nakane

Tue, 7 May 2019 07:23:32 +0100

79 lines

autopocking using laplacian

Eric Hanssen

Mon, 6 May 2019 23:47:21 +0000

1452 lines

Re: Error: A slave has disconnected before all jobs are finished

Tim Grant

Mon, 6 May 2019 17:42:18 -0400

365 lines

Re: star file for multi-body refinement

Takanori Nakane

Mon, 6 May 2019 20:10:24 +0100

47 lines

star file for multi-body refinement

Da Cui

Mon, 6 May 2019 17:36:12 +0100

29 lines

Error: A slave has disconnected before all jobs are finished

SEUNGHYEON SEOK

Mon, 6 May 2019 15:32:02 +0000

203 lines

Research Associate position in Cambridge, UK *one week left to apply*

Luca Pellegrini

Mon, 6 May 2019 09:57:56 +0100

157 lines

Re: GPU upgrade?

Christopher Lilienthal

Fri, 3 May 2019 11:26:14 -0400

326 lines

Reminder: "Macromolecules in Action" International Symposium on Integrated biology!

Eaazhisai Kandiah

Fri, 3 May 2019 15:23:35 +0200

5546 lines

Re: postdoc position available in Peijun zhang lab in Oxford

<>

Thu, 2 May 2019 23:06:58 -0500

261 lines

Re: GPU upgrade?

Takanori Nakane

Thu, 2 May 2019 22:58:56 +0100

115 lines

Re: GPU upgrade?

Takanori Nakane

Thu, 2 May 2019 22:21:13 +0100

83 lines

GPU upgrade?

Eric J. Montemayor

Thu, 2 May 2019 19:41:45 +0000

152 lines

Cryo-EM facility team leader position at Duke University

Seok-Yong Lee

Thu, 2 May 2019 12:57:14 -0400

114 lines

postdoc position available in Peijun zhang lab in Oxford

<>

Thu, 2 May 2019 00:01:18 -0500

204 lines

Re: CCP-EM Spring Symposium - Live Stream

Colin Palmer - UKRI STFC

Wed, 1 May 2019 08:14:47 +0000

127 lines

Positions available: GPCR structure by cryoEM

Patrick M Sexton

Wed, 1 May 2019 01:23:55 +0100

26 lines

JiscMail Tools


RSS Feeds and Sharing


Advanced Options


Archives

August 2019
July 2019
June 2019
May 2019
April 2019
March 2019
February 2019
January 2019
December 2018
November 2018
October 2018
September 2018
August 2018
July 2018
June 2018
May 2018
April 2018
March 2018
February 2018
January 2018
December 2017
November 2017
October 2017
September 2017
August 2017
July 2017
June 2017
May 2017
April 2017
March 2017
February 2017
January 2017
December 2016
November 2016
October 2016
September 2016
August 2016
July 2016
June 2016
May 2016
April 2016
March 2016
February 2016
January 2016
December 2015
November 2015
October 2015
September 2015
August 2015
July 2015
June 2015
May 2015
April 2015
March 2015
February 2015
January 2015
December 2014
November 2014
October 2014
September 2014
August 2014
July 2014
June 2014
May 2014
April 2014
March 2014
February 2014
January 2014
December 2013
November 2013
October 2013
September 2013
August 2013
July 2013
June 2013
May 2013
April 2013
March 2013
February 2013


JiscMail is a Jisc service.

View our service policies at https://www.jiscmail.ac.uk/policyandsecurity/ and Jisc's privacy policy at https://www.jisc.ac.uk/website/privacy-notice

Secured by F-Secure Anti-Virus CataList Email List Search Powered by the LISTSERV Email List Manager