JiscMail Logo
Email discussion lists for the UK Education and Research communities

Help for CCPEM Archives


CCPEM Archives

CCPEM Archives


October 2018


View:

Show Contributor List | Hide Contributor List

 

List of Contributors:

<> (3 messages)
Abhiram Chintangal (5 messages)
Ahel,Juraj (2 messages)
Alex Cook (1 message)
Alex de Marco (1 message)
Ali Punjani (1 message)
Alpay Burak Seven (1 message)
Anthony Fitzpatrick (1 message)
ARULANANDAM Jeyaprakash (1 message)
Bjoern Forsberg (1 message)
BN Chaudhuri (1 message)
Bruno KLAHOLZ (1 message)
Carlos Oscar Sorzano (3 messages)
Charles Bayly-Jones (1 message)
Charles Bowman (1 message)
Chen Sun (2 messages)
Chia-Hsueh Lee ([log in to unmask]) (1 message)
Chiara Rapisarda (1 message)
Chris Richardson (1 message)
Colin Palmer - UKRI STFC (1 message)
Craig Yoshioka (3 messages)
Da Cui (3 messages)
Daniel Asarnow (1 message)
David Bhella (1 message)
Dimitry Tegunov (2 messages)
Dmitry Lyumkis (1 message)
Douglas Duckworth (2 messages)
Dr. Amir Apelbaum (1 message)
Dr. Clara Cai (2 messages)
Eaazhisai KANDIAH (1 message)
Ed Eng (1 message)
Elinor Breiner (1 message)
Eric Hanssen (1 message)
Erik Lindahl (1 message)
Felix Weis (1 message)
Fitzpatrick, James (1 message)
Gabriel Lander (1 message)
Goetz, Patrick G (1 message)
Gregory Alushin (2 messages)
Grzegorz Chojnowski (1 message)
haaris safdari (4 messages)
Hemanth Kumar Narayana Reddy (1 message)
Hong Zhan (1 message)
Hoover, David (NIH/CIT) [E] (1 message)
Hoover, David (2 messages)
Ibrahim M. Moustafa (2 messages)
Jeongyoon Choi (1 message)
Joaquin Ortega, Dr. (1 message)
Joe Atherton (1 message)
John Briggs (1 message)
John Heumann (1 message)
Jose Miguel de la Rosa Trevin (1 message)
Joseph Atherton (3 messages)
Joshua Lobo (3 messages)
Julien Bergeron (1 message)
Karen McIntyre - UKRI STFC (4 messages)
Khursheed Ali (1 message)
Krieger, James M (2 messages)
krish (1 message)
Leonid Sazanov (8 messages)
Liz Kellogg (2 messages)
Marin van Heel (5 messages)
Markus Stabrin (1 message)
[log in to unmask] (1 message)
Matthew Iadanza (1 message)
Max Wilkinson (1 message)
Mia Shin (1 message)
Michael Landsberg (1 message)
Nicholas Gao (2 messages)
Oliver Clarke (2 messages)
Pablo Conesa (2 messages)
Peter Rosenthal (1 message)
Po-Lin Chiu (1 message)
Pranav Shah (1 message)
Raffaella Carzaniga (1 message)
Ragan, Tj (Dr.) (1 message)
Rick Baker (1 message)
Ross Walker (3 messages)
Sandip Basak (1 message)
Sara Weaver (1 message)
Sayan Bhakta (2 messages)
Sean Connell (1 message)
Sebastian Guettler (1 message)
Sergey Nazarov (2 messages)
Sergio A. Sampieri (4 messages)
Sheemei Lok (1 message)
Shintaro Aibara (3 messages)
Simon Fromm (1 message)
Sjors Scheres (13 messages)
Soledad Banos Mateos (1 message)
Sonya James (2 messages)
Speck, Christian (2 messages)
SUBSCRIBE CCPEM Anonymous (1 message)
Szymon W Manka (1 message)
Takanori Nakane (30 messages)
Tasuku HAMAGUCHI (2 messages)
Teige Matthews-Palmer (1 message)
Thejusvi Ganesh (1 message)
Thomas Bausewein (2 messages)
Thomas Laughlin (1 message)
Tim Grant (1 message)
vincent Chaptal (2 messages)
Wilkinson, Martin (1 message)
Wim Hagen (1 message)
Wu, Weimin (NIH/NCI) [C] (2 messages)
Xiaofeng Tan (2 messages)
Xinchao Yu (2 messages)
Xinchao (1 message)
Yashar Sadian (4 messages)
Yehuda Halfon (2 messages)
Yonghong Bai (1 message)
Yu Xinchao (9 messages)
Yuan, Peng (1 message)
Zhaoming Su (1 message)

LISTSERV Archives

LISTSERV Archives

CCPEM Home

CCPEM Home

Options

Subscribe or Unsubscribe

Subscribe or Unsubscribe

Log In

Log In

Get Password

Get Password

Subject

From Sorted by Sender, Chronologically

Date

Size

New Sender

<>

3 postdoc positions available in Peijun zhang lab in Oxford

<>

Fri, 19 Oct 2018 13:11:44 +0100

398 lines

Re: Query related to Ximdis and CCP-EM - Need Help

<>

Sun, 21 Oct 2018 23:31:33 +0100

77 lines

TWO cryoEM support scientist positions at eBIC

<>

Wed, 24 Oct 2018 21:07:18 +0100

183 lines

New Sender

Abhiram Chintangal

Re: advice on GPUs

Abhiram Chintangal

Thu, 4 Oct 2018 00:30:29 -0700

257 lines

Building Relion 3.0 for HPC

Abhiram Chintangal

Tue, 16 Oct 2018 09:55:28 -0700

133 lines

Re: Building Relion 3.0 for HPC

Abhiram Chintangal

Wed, 17 Oct 2018 08:38:00 -0700

302 lines

Re: Building Relion 3.0 for HPC

Abhiram Chintangal

Sat, 20 Oct 2018 11:43:19 -0700

312 lines

Re: Building Relion 3.0 for HPC

Abhiram Chintangal

Mon, 22 Oct 2018 09:29:20 -0700

359 lines

New Sender

Ahel,Juraj

Relion 2D classification with input references

Ahel,Juraj

Thu, 11 Oct 2018 17:25:30 +0000

878 lines

Re: Relion 2D classification with input references

Ahel,Juraj

Fri, 19 Oct 2018 13:17:49 +0000

259 lines

New Sender

Alex Cook

Re: solvent masks in supervised 3d classification (relion)

Alex Cook

Mon, 1 Oct 2018 15:41:42 +0000

25 lines

New Sender

Alex de Marco

cryoEM course in Prato Tuscany

Alex de Marco

Tue, 23 Oct 2018 21:50:44 +1100

175 lines

New Sender

Ali Punjani

Re: K80 vs P100, what should I do?

Ali Punjani

Sun, 30 Sep 2018 19:25:05 -0400

189 lines

New Sender

Alpay Burak Seven

Re: Building Relion 3.0 for HPC

Alpay Burak Seven

Fri, 19 Oct 2018 11:54:50 -0700

224 lines

New Sender

Anthony Fitzpatrick

Cryo-EM Post-Doctoral Opportunities in New York

Anthony Fitzpatrick

Thu, 11 Oct 2018 22:24:45 +0100

66 lines

New Sender

ARULANANDAM Jeyaprakash

CryoEM Postdoctoral position, Wellcome Centre for Cell Biology, Edinburgh

ARULANANDAM Jeyaprakash

Mon, 15 Oct 2018 09:09:33 +0000

254 lines

New Sender

Bjoern Forsberg

Re: Relion 2D classification with input references

Bjoern Forsberg

Fri, 12 Oct 2018 08:25:01 +0200

970 lines

New Sender

BN Chaudhuri

Re: CryoEM and Xray maps?

BN Chaudhuri

Fri, 5 Oct 2018 17:48:32 +0530

183 lines

New Sender

Bruno KLAHOLZ

Re: Cryo-EM Full Professor position at Strasbourg University

Bruno KLAHOLZ

Mon, 1 Oct 2018 18:45:00 +0000

510 lines

New Sender

Carlos Oscar Sorzano

Re: Artefact in relion unfil half-maps

Carlos Oscar Sorzano

Wed, 31 Oct 2018 12:44:00 +0100

47876 lines

Re: lost gain reference image

Carlos Oscar Sorzano

Tue, 2 Oct 2018 20:17:08 +0200

50 lines

Re: lost gain reference image

Carlos Oscar Sorzano

Tue, 2 Oct 2018 20:19:10 +0200

63 lines

New Sender

Charles Bayly-Jones

Re: Ewald sphere correction

Charles Bayly-Jones

Fri, 26 Oct 2018 21:26:41 +1100

280 lines

New Sender

Charles Bowman

Re: Provisional RTX2080TI Benchmark

Charles Bowman

Sat, 20 Oct 2018 03:05:29 +0000

213 lines

New Sender

Chen Sun

Relion/3.0 motion correction

Chen Sun

Fri, 5 Oct 2018 23:33:38 +0000

211 lines

Re: Relion/3.0 motion correction

Chen Sun

Sat, 6 Oct 2018 20:14:39 +0000

4774 lines

New Sender

Chia-Hsueh Lee ([log in to unmask])

Ctfrefine error

Chia-Hsueh Lee ([log in to unmask])

Sat, 20 Oct 2018 00:15:23 +0100

99 lines

New Sender

Chiara Rapisarda

importing .box from cryolo in relion 3

Chiara Rapisarda

Thu, 25 Oct 2018 11:09:17 +0200

2013 lines

New Sender

Chris Richardson

Relion command line submission of jobs into the pipeline

Chris Richardson

Wed, 24 Oct 2018 14:33:04 +0000

33 lines

New Sender

Colin Palmer - UKRI STFC

Re: Query related to Ximdis and CCP-EM - Need Help

Colin Palmer - UKRI STFC

Mon, 22 Oct 2018 10:52:28 +0000

82 lines

New Sender

Craig Yoshioka

Re: lost gain reference image

Craig Yoshioka

Mon, 1 Oct 2018 18:51:57 +0000

31 lines

PNCC announcement

Craig Yoshioka

Wed, 17 Oct 2018 20:45:04 +0000

188 lines

Re: Provisional RTX2080TI Benchmark

Craig Yoshioka

Fri, 19 Oct 2018 07:15:22 +0000

139 lines

New Sender

Da Cui

erroe message from particle extraction in relion 3

Da Cui

Sat, 13 Oct 2018 17:38:56 +0100

24 lines

error message on motioncor/relion 3.0

Da Cui

Tue, 2 Oct 2018 03:52:08 +0100

32 lines

lost gain reference image

Da Cui

Mon, 1 Oct 2018 19:36:42 +0100

23 lines

New Sender

Daniel Asarnow

Re: Provisional RTX2080TI Benchmark

Daniel Asarnow

Thu, 18 Oct 2018 21:30:24 -0700

77 lines

New Sender

David Bhella

Ewald sphere correction

David Bhella

Fri, 26 Oct 2018 10:20:28 +0000

30827 lines

New Sender

Dimitry Tegunov

Re: lost gain reference image

Dimitry Tegunov

Tue, 2 Oct 2018 12:54:53 +0200

209 lines

Re: lost gain reference image (Camera Normalization)

Dimitry Tegunov

Tue, 2 Oct 2018 20:27:51 +0200

241 lines

New Sender

Dmitry Lyumkis

Re: Final resolution by Ewald sphere correction

Dmitry Lyumkis

Mon, 29 Oct 2018 14:00:37 +0000

233 lines

New Sender

Douglas Duckworth

Re: Building Relion 3.0 for HPC

Douglas Duckworth

Wed, 17 Oct 2018 14:27:48 +0000

166 lines

Re: Building Relion 3.0 for HPC

Douglas Duckworth

Wed, 17 Oct 2018 14:27:48 +0000

166 lines

New Sender

Dr. Amir Apelbaum

Re: DMSO max concentration for single particle cryo EM

Dr. Amir Apelbaum

Thu, 25 Oct 2018 07:24:12 +0000

221 lines

New Sender

Dr. Clara Cai

Re: Provisional RTX2080TI Benchmark

Dr. Clara Cai

Sat, 20 Oct 2018 22:14:18 -0700

215 lines

Re: Provisional RTX2080TI Benchmark

Dr. Clara Cai

Sun, 28 Oct 2018 09:25:47 -0700

286 lines

New Sender

Eaazhisai KANDIAH

Cryo-EM experiments at the ESRF, France in 2019

Eaazhisai KANDIAH

Wed, 10 Oct 2018 11:53:11 +0200

113 lines

New Sender

Ed Eng

Accepting General User and Training Proposals to the National Center for CryoEM Access and Training (NCCAT) - NYC, USA

Ed Eng

Mon, 22 Oct 2018 22:15:02 +0000

271 lines

New Sender

Elinor Breiner

DMSO max concentration for single particle cryo EM

Elinor Breiner

Wed, 24 Oct 2018 07:31:02 +0000

169 lines

New Sender

Eric Hanssen

Re: Relion3 multi-body refinement question

Eric Hanssen

Thu, 11 Oct 2018 20:12:10 +0000

210 lines

New Sender

Erik Lindahl

Re: K80 vs P100, what should I do?

Erik Lindahl

Mon, 1 Oct 2018 01:04:31 +0200

150 lines

New Sender

Felix Weis

EMBL Workshop "Cryo-EM in Industry & Academia", Heidelberg, 6-8 February 2019

Felix Weis

Fri, 19 Oct 2018 12:51:47 +0000

65 lines

New Sender

Fitzpatrick, James

Re: Cryo-EM Post-doctoral Opportunity

Fitzpatrick, James

Wed, 10 Oct 2018 12:52:39 +0000

365 lines

New Sender

Gabriel Lander

Re: Relion3 multi-body refinement question

Gabriel Lander

Thu, 11 Oct 2018 12:35:09 -0700

177 lines

New Sender

Goetz, Patrick G

Re: Readout of number of particles in Relion

Goetz, Patrick G

Mon, 15 Oct 2018 19:29:33 +0000

37 lines

New Sender

Gregory Alushin

Relion motioncorr pixel size

Gregory Alushin

Mon, 15 Oct 2018 14:55:34 +0000

104 lines

Re: Relion motioncorr pixel size

Gregory Alushin

Tue, 16 Oct 2018 18:08:49 +0000

58 lines

New Sender

Grzegorz Chojnowski

ARP/wARP 8.0 release

Grzegorz Chojnowski

Fri, 19 Oct 2018 17:09:53 +0200

131 lines

New Sender

haaris safdari

Autopicking

haaris safdari

Tue, 23 Oct 2018 17:09:38 +0530

1903 lines

Re: Autopicking

haaris safdari

Tue, 23 Oct 2018 17:33:16 +0530

2039 lines

Re: Autopicking

haaris safdari

Tue, 23 Oct 2018 22:21:11 +0530

389 lines

Re: Autopicking

haaris safdari

Tue, 23 Oct 2018 22:28:46 +0530

524 lines

New Sender

Hemanth Kumar Narayana Reddy

Re: CryoEM and Xray maps?

Hemanth Kumar Narayana Reddy

Fri, 5 Oct 2018 08:41:40 +0000

205 lines

New Sender

Hong Zhan

Re: relion_prepare_subtomograms.py

Hong Zhan

Tue, 23 Oct 2018 17:42:14 +0100

38 lines

New Sender

Hoover, David (NIH/CIT) [E]

multiple users running RELION in the same project directory

Hoover, David (NIH/CIT) [E]

Fri, 26 Oct 2018 13:35:36 -0400

22 lines

New Sender

Hoover, David

MotionCor2 version 1.2.0 and RELION

Hoover, David

Thu, 18 Oct 2018 09:05:03 -0400

20 lines

RELION 3.0 bug

Hoover, David

Thu, 18 Oct 2018 09:02:14 -0400

24 lines

New Sender

Ibrahim M. Moustafa

MotiionCor2 warning message

Ibrahim M. Moustafa

Wed, 31 Oct 2018 12:07:50 -0400

89 lines

Re: MotiionCor2 warning message

Ibrahim M. Moustafa

Wed, 31 Oct 2018 12:44:11 -0400

188 lines

New Sender

Jeongyoon Choi

Re: [ccpem] Merge two data sets with different pixel sizes

Jeongyoon Choi

Tue, 30 Oct 2018 14:24:13 +0000

220 lines

New Sender

Joaquin Ortega, Dr.

Tenure-Track Assistant/Associate Professor Position at McGill

Joaquin Ortega, Dr.

Tue, 30 Oct 2018 16:04:27 +0000

5375 lines

New Sender

Joe Atherton

Re: Artefact in relion unfil half-maps

Joe Atherton

Mon, 29 Oct 2018 12:41:13 +0000

28557 lines

New Sender

John Briggs

Positions available in MRC-LMB EM Facility

John Briggs

Wed, 31 Oct 2018 11:36:38 +0000

106 lines

New Sender

John Heumann

Relion3.0 Beta - micrographs with too few particles

John Heumann

Fri, 12 Oct 2018 21:11:21 +0100

34 lines

New Sender

Jose Miguel de la Rosa Trevin

Scipion release v1.2.1

Jose Miguel de la Rosa Trevin

Tue, 2 Oct 2018 15:47:11 +0200

207 lines

New Sender

Joseph Atherton

Re: set2DSlice error

Joseph Atherton

Fri, 26 Oct 2018 13:14:05 +0100

63 lines

tilted phase-plate data

Joseph Atherton

Tue, 30 Oct 2018 17:53:13 +0000

29 lines

Re: tilted phase-plate data

Joseph Atherton

Wed, 31 Oct 2018 11:32:48 +0000

79 lines

New Sender

Joshua Lobo

Re: Installing RELION, please hep!

Joshua Lobo

Sun, 21 Oct 2018 11:19:24 +0100

124 lines

Re: Query related to Ximdis and CCP-EM - Need Help

Joshua Lobo

Sun, 21 Oct 2018 22:30:57 +0100

162 lines

Re: Relion3.0 Beta - micrographs with too few particles

Joshua Lobo

Fri, 12 Oct 2018 21:30:47 +0100

107 lines

New Sender

Julien Bergeron

PhD position at the University of Sheffield

Julien Bergeron

Mon, 22 Oct 2018 11:21:24 +0100

93 lines

New Sender

Karen McIntyre - UKRI STFC

Reminder - Travel bursaries for CCP4 Study Weekend 2019 - deadline for applications this Wednesday

Karen McIntyre - UKRI STFC

Mon, 22 Oct 2018 08:59:43 +0000

763 lines

Reminder - Travel bursaries for CCP4 Study Weekend 2019 - deadline for applications this Wednesday

Karen McIntyre - UKRI STFC

Mon, 29 Oct 2018 12:39:27 +0000

637 lines

Standard student bursaries to CCP4 Study Weekend 2018

Karen McIntyre - UKRI STFC

Fri, 12 Oct 2018 10:42:59 +0000

624 lines

Travel bursaries for CCP4 Study Weekend 2019 - deadline for applications 31st October 2018

Karen McIntyre - UKRI STFC

Fri, 12 Oct 2018 10:42:34 +0000

561 lines

New Sender

Khursheed Ali

Query related to Ximdis and CCP-EM - Need Help

Khursheed Ali

Mon, 22 Oct 2018 02:29:39 +0530

126 lines

New Sender

Krieger, James M

Re: Merge two data sets with different pixel sizes

Krieger, James M

Tue, 30 Oct 2018 06:06:07 +0000

37 lines

Re: Relion/3.0 motion correction

Krieger, James M

Sat, 6 Oct 2018 03:03:21 +0000

185 lines

New Sender

krish

Cryo-EM Research Associate position

krish

Sun, 28 Oct 2018 18:53:12 -0400

355 lines

New Sender

Leonid Sazanov

Re: Bayesian Polishing b-factor fitting error

Leonid Sazanov

Sat, 13 Oct 2018 15:41:03 +0100

286 lines

Re: Bayesian Polishing b-factor fitting error

Leonid Sazanov

Wed, 17 Oct 2018 06:03:29 +0200

326 lines

Re: Bayesian Polishing b-factor fitting error

Leonid Sazanov

Fri, 19 Oct 2018 18:37:50 +0200

371 lines

Re: Bayesian Polishing b-factor fitting error

Leonid Sazanov

Tue, 23 Oct 2018 13:32:57 +0200

484 lines

Re: Bayesian Polishing b-factor fitting error

Leonid Sazanov

Thu, 25 Oct 2018 20:20:39 +0200

476 lines

Re: Bayesian Polishing b-factor fitting error

Leonid Sazanov

Fri, 26 Oct 2018 14:04:56 +0200

533 lines

Relion GUI suggestion

Leonid Sazanov

Thu, 4 Oct 2018 10:40:41 +0100

30 lines

Re: Relion GUI suggestion

Leonid Sazanov

Thu, 4 Oct 2018 12:09:46 +0200

70 lines

New Sender

Liz Kellogg

exporting motioncorr2 logs to RELION-3 for bayesian polishing

Liz Kellogg

Fri, 12 Oct 2018 10:54:59 -0400

169 lines

Re: exporting motioncorr2 logs to RELION-3 for bayesian polishing

Liz Kellogg

Sat, 13 Oct 2018 19:19:22 -0400

311 lines

New Sender

Marin van Heel

Re: lost gain reference image

Marin van Heel

Mon, 1 Oct 2018 16:23:41 -0300

83 lines

Re: lost gain reference image

Marin van Heel

Tue, 2 Oct 2018 22:21:36 -0300

323 lines

Re: lost gain reference image (Camera Normalization)

Marin van Heel

Tue, 2 Oct 2018 12:51:07 -0300

244 lines

Re: lost gain reference image (Camera Normalization)

Marin van Heel

Wed, 3 Oct 2018 17:47:44 -0300

352 lines

Re: [3dem] [ccpem] lost gain reference image (Camera Normalization)

Marin van Heel

Wed, 3 Oct 2018 17:47:44 -0300

375 lines

New Sender

Markus Stabrin

Re: importing .box from cryolo in relion 3

Markus Stabrin

Thu, 25 Oct 2018 10:38:13 +0000

147 lines

New Sender

[log in to unmask]

Principal Beamline Scientist /Group Leader post for X-ray tomography & Super Resolution Fluorescence Microscopy at B24 Diamond --Deadline 26th October 2018--

[log in to unmask]

Tue, 2 Oct 2018 11:19:06 +0000

76 lines

New Sender

Matthew Iadanza

Re: Readout of number of particles in Relion

Matthew Iadanza

Tue, 16 Oct 2018 21:08:48 +0000

224 lines

New Sender

Max Wilkinson

Re: Merge two data sets with different pixel sizes

Max Wilkinson

Tue, 30 Oct 2018 18:27:39 +0000

386 lines

New Sender

Mia Shin

set2DSlice error

Mia Shin

Thu, 11 Oct 2018 17:59:10 +0000

107 lines

New Sender

Michael Landsberg

advice on GPUs

Michael Landsberg

Thu, 4 Oct 2018 04:35:32 +0000

212 lines

New Sender

Nicholas Gao

MotionCor2 via RELION3 GUI, only do unfinished?

Nicholas Gao

Sat, 6 Oct 2018 17:01:49 -0400

49 lines

Re: MotionCor2 via RELION3 GUI, only do unfinished?

Nicholas Gao

Sat, 6 Oct 2018 17:18:14 -0400

64 lines

New Sender

Oliver Clarke

Re: lost gain reference image (Camera Normalization)

Oliver Clarke

Tue, 2 Oct 2018 12:03:14 -0400

260 lines

relion_flex_analyse recentering without multi-body?

Oliver Clarke

Fri, 12 Oct 2018 11:52:46 -0700

36 lines

New Sender

Pablo Conesa

Re: lost gain reference image

Pablo Conesa

Tue, 2 Oct 2018 08:57:23 +0200

54 lines

Re: lost gain reference image

Pablo Conesa

Tue, 2 Oct 2018 10:08:53 +0200

65 lines

New Sender

Peter Rosenthal

Cryomicroscopy Scientist, Structural Biology Platform, Francis Crick Institute, London

Peter Rosenthal

Wed, 3 Oct 2018 13:35:38 +0000

419 lines

New Sender

Po-Lin Chiu

Winter School of Cryo-EM Workshop at Arizona State University (ASU)

Po-Lin Chiu

Tue, 30 Oct 2018 16:23:19 -0700

131 lines

New Sender

Pranav Shah

Relion multi-body error

Pranav Shah

Mon, 29 Oct 2018 13:44:24 -0400

155 lines

New Sender

Raffaella Carzaniga

Cryo-Microscopy Group annual meeting - Wednesday, 14th November 2018 - University of Nottingham (UK)

Raffaella Carzaniga

Mon, 29 Oct 2018 00:00:25 +0000

252 lines

New Sender

Ragan, Tj (Dr.)

Research Institute Manager post

Ragan, Tj (Dr.)

Tue, 16 Oct 2018 12:03:30 +0000

166 lines

New Sender

Rick Baker

Relion3 multi-body refinement question

Rick Baker

Thu, 11 Oct 2018 11:53:27 -0700

6150 lines

New Sender

Ross Walker

Provisional RTX2080 Benchmark

Ross Walker

Mon, 22 Oct 2018 20:23:03 -0400

269 lines

Provisional RTX2080TI Benchmark

Ross Walker

Thu, 18 Oct 2018 17:24:29 -0400

57 lines

Re: Provisional RTX2080TI Benchmark

Ross Walker

Sat, 20 Oct 2018 09:55:56 -0400

470 lines

New Sender

Sandip Basak

Bayesian error

Sandip Basak

Mon, 8 Oct 2018 01:34:59 +0100

73 lines

New Sender

Sara Weaver

Re: erroe message from particle extraction in relion 3

Sara Weaver

Sat, 13 Oct 2018 13:36:06 -0700

86 lines

New Sender

Sayan Bhakta

Installation of Relion on GPU cluster

Sayan Bhakta

Tue, 23 Oct 2018 22:28:25 +0530

102 lines

Re: Installing RELION, please hep!

Sayan Bhakta

Sun, 21 Oct 2018 15:57:25 +0530

104 lines

New Sender

Sean Connell

Adding jobs to scheduled job

Sean Connell

Sat, 6 Oct 2018 09:14:18 +0000

31 lines

New Sender

Sebastian Guettler

Postdoctoral Position in Biochemistry/Biophysics and Cryo-EM at ICR, London, UK

Sebastian Guettler

Fri, 12 Oct 2018 13:30:54 +0000

165 lines

New Sender

Sergey Nazarov

Re: Merge two data sets with different pixel sizes

Sergey Nazarov

Tue, 30 Oct 2018 08:46:57 +0100

10121 lines

Fwd: [ccpem] Merge two data sets with different pixel sizes

Sergey Nazarov

Tue, 30 Oct 2018 14:18:44 +0100

180 lines

New Sender

Sergio A. Sampieri

Installing RELION, please hep!

Sergio A. Sampieri

Sat, 20 Oct 2018 23:10:16 -0500

1501 lines

Re: Installing RELION, please hep!

Sergio A. Sampieri

Sun, 21 Oct 2018 13:01:01 -0500

314 lines

Re: relion_flex_analyse recentering without multi-body?

Sergio A. Sampieri

Sat, 20 Oct 2018 23:07:41 -0500

1607 lines

Re: relion_flex_analyse recentering without multi-body?

Sergio A. Sampieri

Sun, 21 Oct 2018 04:26:15 -0500

288 lines

New Sender

Sheemei Lok

Postdoctoral fellow positions available in Duke-NUS, Singapore

Sheemei Lok

Fri, 19 Oct 2018 04:04:40 +0000

155 lines

New Sender

Shintaro Aibara

Re: advice on GPUs

Shintaro Aibara

Thu, 4 Oct 2018 13:23:13 +0200

244 lines

Re: Provisional RTX2080TI Benchmark

Shintaro Aibara

Fri, 19 Oct 2018 00:04:53 +0200

240 lines

Re: solvent masks in supervised 3d classification (relion)

Shintaro Aibara

Mon, 1 Oct 2018 18:33:06 +0200

119 lines

New Sender

Simon Fromm

Relion3 CTF Refinement pixel size

Simon Fromm

Thu, 18 Oct 2018 09:03:04 -0700

42 lines

New Sender

Sjors Scheres

Re: Adding jobs to scheduled job

Sjors Scheres

Wed, 10 Oct 2018 19:36:00 +0100

57 lines

Re: Bayesian Polishing b-factor fitting error

Sjors Scheres

Fri, 26 Oct 2018 14:27:38 +0900

985 lines

Re: Bayesian Polishing b-factor fitting error

Sjors Scheres

Mon, 29 Oct 2018 12:25:35 +0000

519 lines

Re: Fwd: Does carbon background inflate overfitting-corrected FSC?

Sjors Scheres

Wed, 10 Oct 2018 19:23:46 +0100

91 lines

Re: exporting motioncorr2 logs to RELION-3 for bayesian polishing

Sjors Scheres

Sat, 13 Oct 2018 09:11:52 +0100

112 lines

Re: multiple users running RELION in the same project directory

Sjors Scheres

Sun, 28 Oct 2018 08:06:41 +0900

73 lines

Re: multiple users running RELION in the same project directory

Sjors Scheres

Sun, 28 Oct 2018 08:26:24 +0900

71 lines

Re: Relion 2D classification with input references

Sjors Scheres

Sat, 13 Oct 2018 09:16:03 +0100

91 lines

Re: Relion3.0 Beta - micrographs with too few particles

Sjors Scheres

Sat, 13 Oct 2018 09:12:41 +0100

80 lines

Re: relion_flex_analyse recentering without multi-body?

Sjors Scheres

Sat, 20 Oct 2018 18:48:09 +0100

92 lines

Re: set2DSlice error

Sjors Scheres

Mon, 15 Oct 2018 21:00:42 +0100

85 lines

Re: solvent masks in supervised 3d classification (relion)

Sjors Scheres

Mon, 1 Oct 2018 17:29:49 +0100

61 lines

Re: solvent masks in supervised 3d classification (relion)

Sjors Scheres

Mon, 1 Oct 2018 18:50:48 +0100

83 lines

New Sender

Soledad Banos Mateos

Postdoctoral Position in Membrane Trafficking Lab at CIC bioGUNE (Bilbao, Spain)

Soledad Banos Mateos

Wed, 3 Oct 2018 15:41:44 +0200

4361 lines

New Sender

Sonya James

Re: Readout of number of particles in Relion

Sonya James

Mon, 15 Oct 2018 14:05:07 +0100

24 lines

Re: Readout of number of particles in Relion

Sonya James

Mon, 15 Oct 2018 14:13:49 +0100

26 lines

New Sender

Speck, Christian

5 days to apply. Postdoctoral Position at Imperial College London - Speck Lab

Speck, Christian

Tue, 2 Oct 2018 08:00:02 +0000

1378 lines

PhD scholarship @ Imperial College London, deadline: 22nd October

Speck, Christian

Sat, 13 Oct 2018 20:30:31 +0000

754 lines

New Sender

SUBSCRIBE CCPEM Anonymous

Re: Relion motioncorr pixel size

SUBSCRIBE CCPEM Anonymous

Mon, 15 Oct 2018 18:45:12 +0100

46 lines

New Sender

Szymon W Manka

Artefact in relion unfil half-maps

Szymon W Manka

Wed, 31 Oct 2018 05:15:48 +0000

90398 lines

New Sender

Takanori Nakane

Re: Artefact in relion unfil half-maps

Takanori Nakane

Wed, 31 Oct 2018 11:23:00 -0000

71 lines

Re: Autopicking

Takanori Nakane

Tue, 23 Oct 2018 12:57:16 +0100

65 lines

Re: Autopicking

Takanori Nakane

Tue, 23 Oct 2018 14:09:55 +0100

123 lines

Re: Autopicking

Takanori Nakane

Tue, 23 Oct 2018 17:54:01 +0100

185 lines

Re: Bayesian polish error (fsc=0)

Takanori Nakane

Tue, 2 Oct 2018 15:16:08 +0100

56 lines

Re: Bayesian Polishing b-factor fitting error

Takanori Nakane

Wed, 17 Oct 2018 17:55:57 +0100

350 lines

Re: Bayesian Polishing b-factor fitting error

Takanori Nakane

Fri, 19 Oct 2018 19:15:49 +0100

400 lines

Re: Bayesian Polishing b-factor fitting error

Takanori Nakane

Tue, 23 Oct 2018 10:34:24 +0100

101 lines

Re: Bayesian Polishing b-factor fitting error

Takanori Nakane

Tue, 23 Oct 2018 10:54:08 +0100

33 lines

Re: Bayesian Polishing b-factor fitting error

Takanori Nakane

Tue, 23 Oct 2018 14:18:54 +0100

448 lines

Re: Bayesian Polishing b-factor fitting error

Takanori Nakane

Thu, 25 Oct 2018 20:17:36 +0100

510 lines

Re: Bayesian Polishing b-factor fitting error

Takanori Nakane

Tue, 30 Oct 2018 10:42:18 -0000

96 lines

Re: Ctfrefine error

Takanori Nakane

Sat, 20 Oct 2018 07:22:53 +0100

99 lines

Re: error message on motioncor/relion 3.0

Takanori Nakane

Tue, 2 Oct 2018 09:42:49 +0100

49 lines

Re: Ewald sphere correction

Takanori Nakane

Fri, 26 Oct 2018 12:57:25 +0100

141 lines

Re: Final resolution by Ewald sphere correction

Takanori Nakane

Fri, 26 Oct 2018 11:58:36 +0100

68 lines

Re: Merge two data sets with different pixel sizes

Takanori Nakane

Tue, 30 Oct 2018 13:51:09 -0000

75 lines

Re: MotiionCor2 warning message

Takanori Nakane

Wed, 31 Oct 2018 16:36:06 -0000

77 lines

Re: MotionCor2 version 1.2.0 and RELION

Takanori Nakane

Thu, 18 Oct 2018 14:13:36 +0100

43 lines

Re: Relion command line submission of jobs into the pipeline

Takanori Nakane

Wed, 24 Oct 2018 15:41:33 +0100

66 lines

Re: Relion GUI suggestion

Takanori Nakane

Thu, 4 Oct 2018 10:57:16 +0100

53 lines

Re: Relion motioncorr pixel size

Takanori Nakane

Mon, 15 Oct 2018 16:33:26 +0100

64 lines

Re: Relion motioncorr pixel size

Takanori Nakane

Mon, 15 Oct 2018 19:57:46 +0100

61 lines

Re: Relion multi-body error

Takanori Nakane

Mon, 29 Oct 2018 17:56:43 -0000

112 lines

Re: Relion/3.0 motion correction

Takanori Nakane

Sat, 6 Oct 2018 07:24:56 +0100

85 lines

Re: Relion/3.0 motion correction

Takanori Nakane

Sat, 6 Oct 2018 22:36:16 +0100

132 lines

Re: Relion3 CTF Refinement pixel size

Takanori Nakane

Thu, 18 Oct 2018 17:17:28 +0100

66 lines

Re: relion_flex_analyse recentering without multi-body?

Takanori Nakane

Fri, 12 Oct 2018 21:04:16 +0100

44 lines

Re: relion_flex_analyse recentering without multi-body?

Takanori Nakane

Sun, 21 Oct 2018 08:04:11 +0100

104 lines

Re: set2DSlice error

Takanori Nakane

Wed, 31 Oct 2018 11:34:28 -0000

130 lines

New Sender

Tasuku HAMAGUCHI

Final resolution by Ewald sphere correction

Tasuku HAMAGUCHI

Fri, 26 Oct 2018 18:51:46 +0900

44 lines

Re: Final resolution by Ewald sphere correction

Tasuku HAMAGUCHI

Mon, 29 Oct 2018 18:51:50 +0900

88 lines

New Sender

Teige Matthews-Palmer

Fwd: Does carbon background inflate overfitting-corrected FSC?

Teige Matthews-Palmer

Wed, 10 Oct 2018 14:08:25 +0000

19655 lines

New Sender

Thejusvi Ganesh

MotionCor2 > v1.0.1 w/ EL6

Thejusvi Ganesh

Wed, 31 Oct 2018 09:52:51 -0700

59 lines

New Sender

Thomas Bausewein

Re: set2DSlice error

Thomas Bausewein

Mon, 22 Oct 2018 13:53:05 +0200

124 lines

Re: set2DSlice error

Thomas Bausewein

Thu, 25 Oct 2018 21:22:54 +0200

59 lines

New Sender

Thomas Laughlin

Re: Bayesian Polishing b-factor fitting error

Thomas Laughlin

Sat, 20 Oct 2018 22:03:34 +0100

23 lines

New Sender

Tim Grant

Re: lost gain reference image

Tim Grant

Mon, 1 Oct 2018 14:54:25 -0400

53 lines

New Sender

vincent Chaptal

CryoEM and Xray maps?

vincent Chaptal

Fri, 5 Oct 2018 10:24:32 +0200

109 lines

Re: CryoEM and Xray maps?

vincent Chaptal

Fri, 5 Oct 2018 10:47:15 +0200

309 lines

New Sender

Wilkinson, Martin

Job Advert | Imperial College London

Wilkinson, Martin

Wed, 17 Oct 2018 15:34:52 +0000

741 lines

New Sender

Wim Hagen

Re: lost gain reference image

Wim Hagen

Mon, 1 Oct 2018 20:47:58 +0200

34 lines

New Sender

Wu, Weimin (NIH/NCI) [C]

Re: Merge two data sets with different pixel sizes

Wu, Weimin (NIH/NCI) [C]

Tue, 30 Oct 2018 12:44:33 +0000

113 lines

Re: set2DSlice error

Wu, Weimin (NIH/NCI) [C]

Wed, 31 Oct 2018 15:27:12 +0000

100 lines

New Sender

Xiaofeng Tan

Re: set2DSlice error

Xiaofeng Tan

Mon, 15 Oct 2018 11:59:12 -0400

139 lines

Re: set2DSlice error

Xiaofeng Tan

Tue, 30 Oct 2018 18:32:43 -0400

221 lines

New Sender

Xinchao Yu

Re: set2DSlice error

Xinchao Yu

Thu, 25 Oct 2018 19:59:15 +0100

31 lines

Re: set2DSlice error

Xinchao Yu

Wed, 31 Oct 2018 14:19:02 +0000

19 lines

New Sender

Xinchao

Merge two data sets with different pixel sizes

Xinchao

Tue, 30 Oct 2018 04:41:58 +0000

22 lines

New Sender

Yashar Sadian

Bayesian polish error (fsc=0)

Yashar Sadian

Tue, 2 Oct 2018 15:11:11 +0100

42 lines

Re: Bayesian polish error (fsc=0)

Yashar Sadian

Tue, 2 Oct 2018 15:23:53 +0100

18 lines

Re: Bayesian Polishing b-factor fitting error

Yashar Sadian

Tue, 23 Oct 2018 11:49:01 +0200

9756 lines

Re: Bayesian Polishing b-factor fitting error

Yashar Sadian

Tue, 23 Oct 2018 12:02:02 +0200

55 lines

New Sender

Yehuda Halfon

Re: Autopicking

Yehuda Halfon

Tue, 23 Oct 2018 11:54:16 +0000

223 lines

Re: Provisional RTX2080TI Benchmark

Yehuda Halfon

Sat, 20 Oct 2018 11:58:41 +0000

227 lines

New Sender

Yonghong Bai

Unable to load Micrographs

Yonghong Bai

Fri, 19 Oct 2018 22:01:25 -0400

158 lines

New Sender

Yu Xinchao

Re: Merge two data sets with different pixel sizes

Yu Xinchao

Tue, 30 Oct 2018 12:26:15 +0000

35 lines

Re: Merge two data sets with different pixel sizes

Yu Xinchao

Tue, 30 Oct 2018 13:01:41 +0000

89 lines

Re: Merge two data sets with different pixel sizes

Yu Xinchao

Tue, 30 Oct 2018 13:02:38 +0000

93 lines

Re: Merge two data sets with different pixel sizes

Yu Xinchao

Tue, 30 Oct 2018 14:07:48 +0000

59 lines

Re: set2DSlice error

Yu Xinchao

Thu, 25 Oct 2018 19:27:54 +0000

66 lines

Re: set2DSlice error

Yu Xinchao

Fri, 26 Oct 2018 12:33:36 +0000

86 lines

Re: set2DSlice error

Yu Xinchao

Wed, 31 Oct 2018 17:52:40 +0000

86 lines

Re: Fwd: [ccpem] Merge two data sets with different pixel sizes

Yu Xinchao

Tue, 30 Oct 2018 13:28:53 +0000

134 lines

Re: [ccpem] Merge two data sets with different pixel sizes

Yu Xinchao

Tue, 30 Oct 2018 14:39:38 +0000

59 lines

New Sender

Yuan, Peng

Postdoctoral positions at Washington University in St Louis

Yuan, Peng

Tue, 2 Oct 2018 15:56:08 +0000

114 lines

New Sender

Zhaoming Su

Re: Bayesian Polishing b-factor fitting error

Zhaoming Su

Mon, 22 Oct 2018 22:27:11 +0000

1135 lines

JiscMail Tools


RSS Feeds and Sharing


Advanced Options


Archives

April 2024
March 2024
February 2024
January 2024
December 2023
November 2023
October 2023
September 2023
August 2023
July 2023
June 2023
May 2023
April 2023
March 2023
February 2023
January 2023
December 2022
November 2022
October 2022
September 2022
August 2022
July 2022
June 2022
May 2022
April 2022
March 2022
February 2022
January 2022
December 2021
November 2021
October 2021
September 2021
August 2021
July 2021
June 2021
May 2021
April 2021
March 2021
February 2021
January 2021
December 2020
November 2020
October 2020
September 2020
August 2020
July 2020
June 2020
May 2020
April 2020
March 2020
February 2020
January 2020
December 2019
November 2019
October 2019
September 2019
August 2019
July 2019
June 2019
May 2019
April 2019
March 2019
February 2019
January 2019
December 2018
November 2018
October 2018
September 2018
August 2018
July 2018
June 2018
May 2018
April 2018
March 2018
February 2018
January 2018
December 2017
November 2017
October 2017
September 2017
August 2017
July 2017
June 2017
May 2017
April 2017
March 2017
February 2017
January 2017
December 2016
November 2016
October 2016
September 2016
August 2016
July 2016
June 2016
May 2016
April 2016
March 2016
February 2016
January 2016
December 2015
November 2015
October 2015
September 2015
August 2015
July 2015
June 2015
May 2015
April 2015
March 2015
February 2015
January 2015
December 2014
November 2014
October 2014
September 2014
August 2014
July 2014
June 2014
May 2014
April 2014
March 2014
February 2014
January 2014
December 2013
November 2013
October 2013
September 2013
August 2013
July 2013
June 2013
May 2013
April 2013
March 2013
February 2013


JiscMail is a Jisc service.

View our service policies at https://www.jiscmail.ac.uk/policyandsecurity/ and Jisc's privacy policy at https://www.jisc.ac.uk/website/privacy-notice

For help and support help@jisc.ac.uk

Secured by F-Secure Anti-Virus CataList Email List Search Powered by the LISTSERV Email List Manager