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July 2017


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Table of Contents:

2D classification on large data set (9 messages)
2nd CryoEM sample preparation Workshop 2-4th Oct 2017 @ DLS - deadline for applications 6th august (1 message)
3 days to go: Cryo-EM Research Scientist position at Imperial College London & MRC LMS (1 message)
3D auto-refine helix parameters error (2 messages)
3D classification from multiple starting models? (2 messages)
<No subject> (1 message)
an error leads to failure of launching Relion (5 messages)
An error runing Motioncor 2 from relion 2 (3 messages)
Assistant Prof position in NUS, Singapore (1 message)
Assistant Professor opportunity at University of Warwick, UK (1 message)
Autorefine3d crashes with 752 box size (2 messages)
B-factor after refmac5 is very low (=2) (1 message)
convert Relion project to JSPR (2 messages)
Cryo Electron Microscopy and Tomography Facility Manager Position at Rutgers New Jersey (1 message)
Cryo-EM Research Scientist position at Imperial College London & MRC LMS (1 message)
Deleted Relion job history (4 messages)
Detergents in samples for cryo-EM (3 messages)
difficulty aligning small particles (6 messages)
eBIC centre coordinator vacancy (1 message)
eps files, ghostscript errors, MPI (1 message)
Error GCTF (5 messages)
Errors in Relion-2.1 (1 message)
exp_thisparticle_sumweight=0 error explained (1 message)
Faculty position at Yale (1 message)
importing DW and noDW correctly (1 message)
local 3DR and Class3D previous experience (1 message)
motioncor2 error: (1 message)
MotionCor2 Runtime (14 messages)
MPI_ABORT (2 messages)
MTF file for Falcon 3 at 300 kV (1 message)
MTF file for K2 at 200 kV (2 messages)
New position: Product Development Scientist at TTP Labtech (1 message)
No out file shows up in Display? (1 message)
Opportunities to work with EMDB/EMPIAR at EMBL-EBI, Hinxton UK (1 message)
position available: Centre Coordinator at eBIC, Diamond Light Source (1 message)
Postdoc positions at Cold Spring Harbor Laboratory (1 message)
Postdoctoral Position in Cryo-EM at ICR, London, UK (1 message)
Postdoctoral position in cryo-EM, Harvard Medical School (1 message)
PSI / CCP4 Workshop "3D Electron Crystallography for Macromolecular Compounds" (1 message)
Relion - save display images (3 messages)
Relion 2.0 CTF error (1 message)
Relion 2.1 hangs during 2d Classification (5 messages)
Relion installation problem GPU station (3 messages)
relion_stack_create (2 messages)
relion_stack_create error (2 messages)
running blocres (1 message)
scipion graphing of ctf estimation from the logs (2 messages)
Several Positions Available at RCSB PDB in UCSD (1 message)
SV: [ccpem] Relion 2.1 hangs during 2d Classification (4 messages)
SV: [ccpem] SV: [ccpem] Relion 2.1 hangs during 2d Classification (2 messages)
the pixel size of gain reference (2 messages)
unfiltered half-maps (5 messages)
Variance map of volumes (6 messages)
Wellcome Trust postdoctoral fellowships available at the University of Oxford (1 message)
[3dem] [ccpem] Variance map of volumes (2 messages)

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Subject Sorted by Subject, Chronologically

Date

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New Thread

2D classification on large data set

2D classification on large data set

Wed, 12 Jul 2017 00:47:34 +0100

24 lines

Re: 2D classification on large data set

Tue, 11 Jul 2017 21:06:37 -0400

50 lines

Re: 2D classification on large data set

Tue, 11 Jul 2017 21:40:53 -0400

61 lines

Re: 2D classification on large data set

Tue, 11 Jul 2017 21:47:00 -0400

127 lines

Re: 2D classification on large data set

Tue, 11 Jul 2017 22:23:15 -0400

3140 lines

Re: 2D classification on large data set

Wed, 12 Jul 2017 09:31:27 +0100

37 lines

Re: 2D classification on large data set

Wed, 12 Jul 2017 17:48:18 +0100

15 lines

Re: 2D classification on large data set

Thu, 13 Jul 2017 08:28:36 -0700

286 lines

Re: 2D classification on large data set

Thu, 13 Jul 2017 11:40:54 -0400

369 lines

New Thread

2nd CryoEM sample preparation Workshop 2-4th Oct 2017 @ DLS - deadline for applications 6th august

2nd CryoEM sample preparation Workshop 2-4th Oct 2017 @ DLS - deadline for applications 6th august

Thu, 13 Jul 2017 13:06:32 +0000

44 lines

New Thread

3 days to go: Cryo-EM Research Scientist position at Imperial College London & MRC LMS

3 days to go: Cryo-EM Research Scientist position at Imperial College London & MRC LMS

Mon, 24 Jul 2017 08:04:47 +0000

931 lines

New Thread

3D auto-refine helix parameters error

3D auto-refine helix parameters error

Tue, 18 Jul 2017 15:40:18 +0800

188 lines

Re: 3D auto-refine helix parameters error

Tue, 25 Jul 2017 14:07:54 +0100

110 lines

New Thread

3D classification from multiple starting models?

3D classification from multiple starting models?

Fri, 28 Jul 2017 13:34:49 +0000

43 lines

Re: 3D classification from multiple starting models?

Fri, 28 Jul 2017 08:06:11 -0700

224 lines

New Thread

<No subject>

Thu, 27 Jul 2017 09:31:49 -0400

81 lines

New Thread

an error leads to failure of launching Relion

an error leads to failure of launching Relion

Sun, 16 Jul 2017 20:58:17 +0100

28 lines

Re: an error leads to failure of launching Relion

Sun, 16 Jul 2017 15:14:11 -0500

87 lines

Re: an error leads to failure of launching Relion

Sun, 16 Jul 2017 21:39:03 +0100

19 lines

Re: an error leads to failure of launching Relion

Sun, 16 Jul 2017 22:40:37 +0100

16 lines

Re: an error leads to failure of launching Relion

Mon, 17 Jul 2017 09:45:00 +0100

44 lines

New Thread

An error runing Motioncor 2 from relion 2

An error runing Motioncor 2 from relion 2

Thu, 6 Jul 2017 12:10:05 +0000

193 lines

Re: An error runing Motioncor 2 from relion 2

Mon, 10 Jul 2017 09:03:25 +0100

46 lines

Re: An error runing Motioncor 2 from relion 2

Mon, 10 Jul 2017 08:43:39 +0000

64 lines

New Thread

Assistant Prof position in NUS, Singapore

Assistant Prof position in NUS, Singapore

Fri, 28 Jul 2017 07:36:39 +0000

98 lines

New Thread

Assistant Professor opportunity at University of Warwick, UK

Assistant Professor opportunity at University of Warwick, UK

Fri, 14 Jul 2017 08:55:32 +0000

211 lines

New Thread

Autorefine3d crashes with 752 box size

Autorefine3d crashes with 752 box size

Mon, 31 Jul 2017 10:46:44 +0200

95 lines

Re: Autorefine3d crashes with 752 box size

Mon, 31 Jul 2017 12:10:54 +0100

72 lines

New Thread

B-factor after refmac5 is very low (=2)

B-factor after refmac5 is very low (=2)

Fri, 21 Jul 2017 19:17:29 +0100

35 lines

New Thread

convert Relion project to JSPR

convert Relion project to JSPR

Tue, 18 Jul 2017 06:33:34 +0000

23 lines

Re: convert Relion project to JSPR

Tue, 18 Jul 2017 16:51:06 +1000

133 lines

New Thread

Cryo Electron Microscopy and Tomography Facility Manager Position at Rutgers New Jersey

Cryo Electron Microscopy and Tomography Facility Manager Position at Rutgers New Jersey

Thu, 13 Jul 2017 16:02:00 -0400

58 lines

New Thread

Cryo-EM Research Scientist position at Imperial College London & MRC LMS

Cryo-EM Research Scientist position at Imperial College London & MRC LMS

Mon, 3 Jul 2017 11:03:33 +0000

902 lines

New Thread

Deleted Relion job history

Re: Deleted Relion job history

Fri, 7 Jul 2017 10:56:23 -0500

159 lines

Re: Deleted Relion job history

Fri, 7 Jul 2017 18:19:26 +0200

315 lines

Re: Deleted Relion job history

Fri, 7 Jul 2017 12:00:40 -0500

333 lines

Re: Deleted Relion job history

Fri, 7 Jul 2017 19:28:01 +0200

435 lines

New Thread

Detergents in samples for cryo-EM

Detergents in samples for cryo-EM

Mon, 10 Jul 2017 09:45:26 +0000

106 lines

Re: Detergents in samples for cryo-EM

Mon, 10 Jul 2017 12:11:30 +0200

162 lines

Re: Detergents in samples for cryo-EM

Mon, 10 Jul 2017 11:29:07 +0100

179 lines

New Thread

difficulty aligning small particles

difficulty aligning small particles

Wed, 19 Jul 2017 09:33:29 -0400

25 lines

Re: difficulty aligning small particles

Wed, 19 Jul 2017 14:58:45 +0100

41 lines

Re: difficulty aligning small particles

Wed, 19 Jul 2017 14:10:46 +0000

43 lines

Re: difficulty aligning small particles

Wed, 19 Jul 2017 17:34:59 +0100

17 lines

Re: difficulty aligning small particles

Wed, 19 Jul 2017 18:46:06 +0100

79 lines

Re: difficulty aligning small particles

Wed, 19 Jul 2017 18:47:45 +0100

33 lines

New Thread

eBIC centre coordinator vacancy

eBIC centre coordinator vacancy

Fri, 21 Jul 2017 17:18:22 +0000

37 lines

New Thread

eps files, ghostscript errors, MPI

eps files, ghostscript errors, MPI

Fri, 7 Jul 2017 17:34:00 +0100

47 lines

New Thread

Error GCTF

Error GCTF

Wed, 19 Jul 2017 11:34:22 +0100

53 lines

Re: Error GCTF

Wed, 19 Jul 2017 06:31:02 -0500

126 lines

Re: Error GCTF

Wed, 19 Jul 2017 12:45:42 +0100

21 lines

Re: Error GCTF

Wed, 19 Jul 2017 12:12:06 +0000

178 lines

Re: Error GCTF

Wed, 19 Jul 2017 16:48:06 +0100

31 lines

New Thread

Errors in Relion-2.1

Errors in Relion-2.1

Mon, 31 Jul 2017 19:44:12 +0000

52 lines

New Thread

exp_thisparticle_sumweight=0 error explained

exp_thisparticle_sumweight=0 error explained

Mon, 17 Jul 2017 09:46:45 +0100

57 lines

New Thread

Faculty position at Yale

Faculty position at Yale

Fri, 28 Jul 2017 20:50:33 +0000

62 lines

New Thread

importing DW and noDW correctly

importing DW and noDW correctly

Mon, 10 Jul 2017 09:30:25 +0100

48 lines

New Thread

local 3DR and Class3D previous experience

local 3DR and Class3D previous experience

Wed, 12 Jul 2017 12:34:30 +0200

64 lines

New Thread

motioncor2 error:

Re: motioncor2 error:

Fri, 21 Jul 2017 16:04:48 +0200

176 lines

New Thread

MotionCor2 Runtime

Re: MotionCor2 Runtime

Tue, 4 Jul 2017 19:39:54 +0200

240 lines

Re: MotionCor2 Runtime

Tue, 4 Jul 2017 11:09:22 -0700

267 lines

Re: MotionCor2 Runtime

Tue, 4 Jul 2017 15:07:20 -0400

293 lines

Re: MotionCor2 Runtime

Tue, 4 Jul 2017 12:14:17 -0700

315 lines

Re: MotionCor2 Runtime

Tue, 4 Jul 2017 19:17:53 +0000

183 lines

Re: MotionCor2 Runtime

Thu, 6 Jul 2017 14:55:02 +0200

349 lines

Re: MotionCor2 Runtime

Thu, 6 Jul 2017 09:25:30 -0700

401 lines

Re: MotionCor2 Runtime

Fri, 7 Jul 2017 08:08:46 -0700

418 lines

Re: MotionCor2 Runtime

Fri, 7 Jul 2017 08:50:10 -0700

469 lines

Re: MotionCor2 Runtime

Fri, 7 Jul 2017 16:11:20 +0000

363 lines

Re: MotionCor2 Runtime

Fri, 7 Jul 2017 09:17:57 -0700

626 lines

Re: MotionCor2 Runtime

Fri, 7 Jul 2017 17:19:58 +0100

664 lines

Re: MotionCor2 Runtime

Fri, 7 Jul 2017 11:09:37 -0700

1017 lines

Re: MotionCor2 Runtime

Fri, 7 Jul 2017 11:41:55 -0700

1052 lines

New Thread

MPI_ABORT

MPI_ABORT

Thu, 13 Jul 2017 12:56:42 +0100

356 lines

Re: MPI_ABORT

Thu, 13 Jul 2017 12:44:21 +0000

374 lines

New Thread

MTF file for Falcon 3 at 300 kV

MTF file for Falcon 3 at 300 kV

Thu, 20 Jul 2017 15:58:04 +0000

67 lines

New Thread

MTF file for K2 at 200 kV

MTF file for K2 at 200 kV

Thu, 20 Jul 2017 19:23:01 +0000

108 lines

Re: MTF file for K2 at 200 kV

Thu, 20 Jul 2017 15:56:43 -0700

107 lines

New Thread

New position: Product Development Scientist at TTP Labtech

New position: Product Development Scientist at TTP Labtech

Tue, 4 Jul 2017 12:44:44 -0400

283 lines

New Thread

No out file shows up in Display?

No out file shows up in Display?

Fri, 14 Jul 2017 09:16:58 -0400

21 lines

New Thread

Opportunities to work with EMDB/EMPIAR at EMBL-EBI, Hinxton UK

Opportunities to work with EMDB/EMPIAR at EMBL-EBI, Hinxton UK

Tue, 25 Jul 2017 16:41:01 +0100

99 lines

New Thread

position available: Centre Coordinator at eBIC, Diamond Light Source

position available: Centre Coordinator at eBIC, Diamond Light Source

Wed, 12 Jul 2017 09:38:43 +0100

77 lines

New Thread

Postdoc positions at Cold Spring Harbor Laboratory

Postdoc positions at Cold Spring Harbor Laboratory

Tue, 25 Jul 2017 14:34:13 +0000

39 lines

New Thread

Postdoctoral Position in Cryo-EM at ICR, London, UK

Postdoctoral Position in Cryo-EM at ICR, London, UK

Fri, 21 Jul 2017 12:38:34 +0000

410 lines

New Thread

Postdoctoral position in cryo-EM, Harvard Medical School

Postdoctoral position in cryo-EM, Harvard Medical School

Tue, 11 Jul 2017 11:50:54 +0000

111 lines

New Thread

PSI / CCP4 Workshop "3D Electron Crystallography for Macromolecular Compounds"

PSI / CCP4 Workshop "3D Electron Crystallography for Macromolecular Compounds"

Sat, 1 Jul 2017 14:39:22 +0200

81 lines

New Thread

Relion - save display images

Relion - save display images

Thu, 6 Jul 2017 13:10:24 +0100

18 lines

Re: Relion - save display images

Thu, 6 Jul 2017 16:56:47 +0100

24 lines

Re: Relion - save display images

Thu, 6 Jul 2017 18:13:15 +0100

35 lines

New Thread

Relion 2.0 CTF error

Relion 2.0 CTF error

Tue, 11 Jul 2017 19:48:38 +0100

32 lines

New Thread

Relion 2.1 hangs during 2d Classification

Relion 2.1 hangs during 2d Classification

Wed, 12 Jul 2017 22:52:18 -0700

90 lines

Re: Relion 2.1 hangs during 2d Classification

Thu, 13 Jul 2017 09:14:37 +0100

102 lines

Re: Relion 2.1 hangs during 2d Classification

Thu, 13 Jul 2017 12:13:13 +0200

121 lines

Re: Relion 2.1 hangs during 2d Classification

Thu, 13 Jul 2017 07:45:54 -0700

178 lines

Re: Relion 2.1 hangs during 2d Classification

Thu, 13 Jul 2017 10:21:36 -0500

414 lines

New Thread

Relion installation problem GPU station

Relion installation problem GPU station

Thu, 13 Jul 2017 11:37:24 +0100

378 lines

Re: Relion installation problem GPU station

Thu, 13 Jul 2017 12:27:05 +0100

236 lines

Re: Relion installation problem GPU station

Thu, 13 Jul 2017 06:43:37 -0500

862 lines

New Thread

relion_stack_create

relion_stack_create

Thu, 27 Jul 2017 20:08:45 +0800

96 lines

Re: relion_stack_create

Thu, 27 Jul 2017 09:10:15 -0400

152 lines

New Thread

relion_stack_create error

relion_stack_create error

Fri, 21 Jul 2017 02:49:58 +0800

54 lines

Re: relion_stack_create error

Thu, 20 Jul 2017 14:39:10 -0500

107 lines

New Thread

running blocres

running blocres

Thu, 27 Jul 2017 17:11:07 +0100

33 lines

New Thread

scipion graphing of ctf estimation from the logs

Re: scipion graphing of ctf estimation from the logs

Thu, 6 Jul 2017 17:11:22 +0100

26 lines

Re: scipion graphing of ctf estimation from the logs

Thu, 6 Jul 2017 18:44:55 +0200

75 lines

New Thread

Several Positions Available at RCSB PDB in UCSD

Several Positions Available at RCSB PDB in UCSD

Thu, 6 Jul 2017 10:32:23 -0400

130 lines

New Thread

SV: [ccpem] Relion 2.1 hangs during 2d Classification

SV: [ccpem] Relion 2.1 hangs during 2d Classification

Thu, 13 Jul 2017 15:35:31 +0000

202 lines

SV: [ccpem] Relion 2.1 hangs during 2d Classification

Thu, 13 Jul 2017 15:35:59 +0000

202 lines

Re: SV: [ccpem] Relion 2.1 hangs during 2d Classification

Fri, 14 Jul 2017 12:08:10 -0700

264 lines

Re: SV: [ccpem] Relion 2.1 hangs during 2d Classification

Sat, 15 Jul 2017 09:21:51 +0100

284 lines

New Thread

SV: [ccpem] SV: [ccpem] Relion 2.1 hangs during 2d Classification

SV: [ccpem] SV: [ccpem] Relion 2.1 hangs during 2d Classification

Sat, 15 Jul 2017 11:44:00 +0000

315 lines

Re: SV: [ccpem] SV: [ccpem] Relion 2.1 hangs during 2d Classification

Mon, 17 Jul 2017 15:57:44 -0700

10533 lines

New Thread

the pixel size of gain reference

the pixel size of gain reference

Sat, 22 Jul 2017 23:32:24 +0800

55 lines

Re: the pixel size of gain reference

Sat, 22 Jul 2017 18:28:50 -0700

104 lines

New Thread

unfiltered half-maps

unfiltered half-maps

Mon, 17 Jul 2017 10:33:40 -0500

53 lines

Re: unfiltered half-maps

Mon, 17 Jul 2017 17:53:56 +0200

86 lines

Re: unfiltered half-maps

Mon, 17 Jul 2017 17:00:26 +0100

52 lines

Re: unfiltered half-maps

Mon, 17 Jul 2017 13:57:38 -0500

135 lines

Re: unfiltered half-maps

Tue, 18 Jul 2017 11:28:07 +0100

91 lines

New Thread

Variance map of volumes

Variance map of volumes

Thu, 20 Jul 2017 22:39:56 +0000

120 lines

Re: Variance map of volumes

Thu, 20 Jul 2017 22:52:32 +0000

203 lines

Re: Variance map of volumes

Thu, 20 Jul 2017 19:57:17 -0300

1227 lines

Re: Variance map of volumes

Fri, 21 Jul 2017 09:49:05 +0200

248 lines

Re: Variance map of volumes

Sun, 23 Jul 2017 00:03:05 -0700

240 lines

Re: Variance map of volumes

Sun, 23 Jul 2017 09:19:58 -0300

380 lines

New Thread

Wellcome Trust postdoctoral fellowships available at the University of Oxford

Wellcome Trust postdoctoral fellowships available at the University of Oxford

Sun, 23 Jul 2017 20:03:49 +0100

341 lines

New Thread

[3dem] [ccpem] Variance map of volumes

Re: [3dem] [ccpem] Variance map of volumes

Thu, 20 Jul 2017 19:57:17 -0300

1245 lines

Re: [3dem] [ccpem] Variance map of volumes

Sun, 23 Jul 2017 09:19:58 -0300

398 lines

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