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June 2017


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Table of Contents:

--dont_check_norm is inconsistent with --continue in 2D Classification? (1 message)
--premultiply_ctf in RELION (2 messages)
1) relion-2.1 beta 0: reextract particles 2) relion_mask_create (3 messages)
1080Ti temperatures (7 messages)
A Faculty Position in the Department of Biophysics, NIMHANS, Bangalore, India (2 messages)
Any GTX 1080Ti conclusions yet? (5 messages)
Artefact in relion unfil half-maps (3 messages)
artifact in 2D class averages (2 messages)
Cannot get CTF values and unrecognised label type in MetaDataContainer value Exist in Relion v2.0.5 (1 message)
CCP-EM Spring Symposium Talks and Proceedings (1 message)
Cryo EM /tomography postdoc position in Grenoble France (1 message)
cryo-EM facility manager position at the University of Groningen (1 message)
CryoEM postdoctoral position at the Wellcome Centre for Cell Biology, Edinburgh, UK (1 message)
Data annotation and consistency on EMPIAR - possible improvements? (1 message)
Dose Weighting of Unequal Dose Movie (1 message)
EMBL-EBI user survey (1 message)
Error running Motioncor2 from Relion 2 GUI (3 messages)
ESRF-SANOFI joint PhD position in cryo EM; Grenoble France (1 message)
Facility Manager position - London - Deadline Approaching (1 message)
from Appion to Relion (2 messages)
gctf vs ctffind and resolution (2 messages)
Instrumental Resolution versus Results Resolution (1 message)
Job Offer: Structural Biologist-Membrane Proteins, Vertex Pharmaceuticals UK (1 message)
Joint CCP-EM & CCP-BioSim Workshop on EM & MD @University of Leeds (1 message)
Joint CCP-EM & CCP-BioSim Workshop on EM & MD @University of Leeds 13/14th July (1 message)
Kendrew Symposium, 16-17 Nov 2017, EMBL Heidelberg, Germany (1 message)
LIVESTREAMING: Cryo-EM Symposium, 6-7 July 2017, Grenoble, France (2 messages)
low-pass filter implemented in RELION (3 messages)
Masks for focussed refinement (1 message)
Methods developer post at York, UK (1 message)
Minimum standards for FSC reporting? (3 messages)
Model bias in 3D autorefine (3 messages)
motioncor2 error: (1 message)
Motioncorr 2.1 (1 message)
MPI problems with Relion 2.1 on Ubuntu 16.0.4.2 LTS (11 messages)
postdoc position in C. difficile structural biology (1 message)
Postdoctoral Position Available: CNPEM (Campinas, Brazil) (1 message)
Postdoctoral position in cryoEM, University of Manchester (1 message)
Postdoctoral position in structural biology at the Wellcome Centre for Cell Biology, Edinburgh, UK (1 message)
Postdoctoral position in time-resolved EM at the University of Leeds (1 message)
Problem with relion 2.1-beta and chimera 1.11.2 (1 message)
PSI / CCP4 Workshop "3D Electron Crystallography for Macromolecular Compounds" (1 message)
random_seed option in 2Dclassification (1 message)
Release of the latest version of SPHIRE (1 message)
Relion 2.0 Helical 3D classification error (1 message)
Relion 2.0stable Helical 3D classification error (1 message)
Relion 2.1 on multiple GPU nodes (2 messages)
relion 2.1-beta make -j error (2 messages)
Relion error launching GUI (new version) (2 messages)
Relion Extraction error (4 messages)
RELION movie processing - typical raw particle tracks? (2 messages)
Relion particle subtraction > uniformly gray image in 'File Display' (1 message)
relion-2.1-beta (2 messages)
relion-2.1-beta-0: 'Sort' crashes when run on particles from Class2D (1 message)
Relion21 Tutorial : WARNING: skipping, since cannot get CTF values for (7 messages)
relion_preprocess gives empty black particles when using ctf options (4 messages)
relion_reconstruct for subtomogram data (3 messages)
Reminder: cryo-EM conference in Bonn (Germany) (1 message)
Remove over-represented orientations (3 messages)
Sampling of local resolution with symmetry? (3 messages)
scipion graphing of ctf estimation from the logs (2 messages)
SGD in RELION-2.1-beta not utilizing GPU's (1 message)
Solvent masks and reference in relion_refine (2 messages)
SPHIRE Workshop. Bonn, 11-12 Sept (1 message)
Super-res plus lower mag to improve CTF correction? (7 messages)
Tenure Track Positions at University of Leeds (1 message)
The CompBioMed Newsletter, Issue No.1, May 2017 (1 message)
The Francis Crick Electron Microscopy Opening Symposium, London July 12th - 14th 2017 - Registration closes this Wednesday 21st June (1 message)
Tilted 2D classification results (1 message)
unusual CTF (3 messages)
use of GUI (19 messages)
VPP high magnification dataset doesn't refine past 4 Angstrom (4 messages)
We have release Scipion v1.1 with new Xmipp methods (10 messages)
[3dem] Postdoctoral Position Available: CNPEM (Campinas, Brazil) REMINDER (1 message)
[3dem] [ccpem] Minimum standards for FSC reporting? (5 messages)
[3dem] [TEM] CTF and SNR (5 messages)

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Subject Sorted by Subject, Chronologically

From

Date

Size

New Thread

--dont_check_norm is inconsistent with --continue in 2D Classification?

--dont_check_norm is inconsistent with --continue in 2D Classification?

Ambrose Plante <[log in to unmask]>

Wed, 28 Jun 2017 16:10:33 +0100

79 lines

New Thread

--premultiply_ctf in RELION

--premultiply_ctf in RELION

David Dynerman <[log in to unmask]>

Tue, 27 Jun 2017 10:25:10 -0700

26 lines

Re: --premultiply_ctf in RELION

Sjors Scheres <[log in to unmask]>

Tue, 27 Jun 2017 20:10:44 +0100

49 lines

New Thread

1) relion-2.1 beta 0: reextract particles 2) relion_mask_create

1) relion-2.1 beta 0: reextract particles 2) relion_mask_create

Dieter Blaas <[log in to unmask]>

Mon, 19 Jun 2017 07:10:53 +0200

53 lines

Re: 1) relion-2.1 beta 0: reextract particles 2) relion_mask_create

Bjoern Forsberg <[log in to unmask]>

Mon, 19 Jun 2017 10:13:07 +0200

75 lines

Re: 1) relion-2.1 beta 0: reextract particles 2) relion_mask_create

Dieter Blaas <[log in to unmask]>

Mon, 19 Jun 2017 12:13:50 +0200

98 lines

New Thread

1080Ti temperatures

1080Ti temperatures

Reza Khayat <[log in to unmask]>

Thu, 15 Jun 2017 04:17:28 +0000

27 lines

Re: 1080Ti temperatures

Craig Yoshioka <[log in to unmask]>

Thu, 15 Jun 2017 04:20:28 +0000

27 lines

Re: 1080Ti temperatures

Joseph Box <[log in to unmask]>

Thu, 15 Jun 2017 04:20:41 +0000

106 lines

Re: 1080Ti temperatures

Bharat Reddy <[log in to unmask]>

Thu, 15 Jun 2017 00:31:32 -0500

49 lines

Re: 1080Ti temperatures

Alex Noble <[log in to unmask]>

Thu, 15 Jun 2017 08:16:22 +0000

143 lines

Re: 1080Ti temperatures

Erik Lindahl <[log in to unmask]>

Thu, 15 Jun 2017 10:28:40 +0200

220 lines

Re: 1080Ti temperatures

Reza Khayat <[log in to unmask]>

Thu, 15 Jun 2017 12:06:28 +0000

343 lines

New Thread

A Faculty Position in the Department of Biophysics, NIMHANS, Bangalore, India

A Faculty Position in the Department of Biophysics, NIMHANS, Bangalore, India

Padmanabhan B <[log in to unmask]>

Sat, 17 Jun 2017 18:05:44 +0530

126 lines

A faculty position in the Department of Biophysics, NIMHANS, Bangalore, India

Padmanabhan B <[log in to unmask]>

Wed, 28 Jun 2017 09:23:15 +0530

130 lines

New Thread

Any GTX 1080Ti conclusions yet?

Any GTX 1080Ti conclusions yet?

Christopher Lilienthal <[log in to unmask]>

Thu, 8 Jun 2017 12:39:15 -0400

22 lines

Re: Any GTX 1080Ti conclusions yet?

Jianhua Zhao <[log in to unmask]>

Thu, 8 Jun 2017 10:20:55 -0700

35 lines

Re: Any GTX 1080Ti conclusions yet?

Erik Lindahl <[log in to unmask]>

Thu, 8 Jun 2017 19:41:24 +0200

56 lines

Re: Any GTX 1080Ti conclusions yet?

Christopher Lilienthal <[log in to unmask]>

Thu, 8 Jun 2017 14:10:25 -0400

62 lines

Re: Any GTX 1080Ti conclusions yet?

Ross Walker <[log in to unmask]>

Fri, 9 Jun 2017 11:31:45 +0200

40 lines

New Thread

Artefact in relion unfil half-maps

Artefact in relion unfil half-maps

Miguel Zamora <[log in to unmask]>

Wed, 14 Jun 2017 17:02:57 +0100

3016 lines

Re: Artefact in relion unfil half-maps

Sjors Scheres <[log in to unmask]>

Thu, 15 Jun 2017 06:26:33 +0100

47 lines

Re: Artefact in relion unfil half-maps

Miguel Zamora <[log in to unmask]>

Thu, 15 Jun 2017 10:18:04 +0100

18 lines

New Thread

artifact in 2D class averages

artifact in 2D class averages

Hun Roh <[log in to unmask]>

Thu, 15 Jun 2017 06:04:49 +0100

33019 lines

Re: artifact in 2D class averages

Sjors Scheres <[log in to unmask]>

Thu, 15 Jun 2017 06:25:06 +0100

45 lines

New Thread

Cannot get CTF values and unrecognised label type in MetaDataContainer value Exist in Relion v2.0.5

Cannot get CTF values and unrecognised label type in MetaDataContainer value Exist in Relion v2.0.5

Keda Zhou <[log in to unmask]>

Thu, 15 Jun 2017 17:36:56 +0100

38 lines

New Thread

CCP-EM Spring Symposium Talks and Proceedings

CCP-EM Spring Symposium Talks and Proceedings

Tom Burnley <[log in to unmask]>

Thu, 8 Jun 2017 12:38:51 +0100

90 lines

New Thread

Cryo EM /tomography postdoc position in Grenoble France

Cryo EM /tomography postdoc position in Grenoble France

guy schoehn <[log in to unmask]>

Tue, 6 Jun 2017 16:54:28 +0200

1660 lines

New Thread

cryo-EM facility manager position at the University of Groningen

cryo-EM facility manager position at the University of Groningen

Cristina Paulino <[log in to unmask]>

Tue, 27 Jun 2017 20:08:10 +0200

263 lines

New Thread

CryoEM postdoctoral position at the Wellcome Centre for Cell Biology, Edinburgh, UK

CryoEM postdoctoral position at the Wellcome Centre for Cell Biology, Edinburgh, UK

ARULANANDAM Jeyaprakash <[log in to unmask]>

Wed, 7 Jun 2017 11:13:31 +0000

237 lines

New Thread

Data annotation and consistency on EMPIAR - possible improvements?

Data annotation and consistency on EMPIAR - possible improvements?

Oliver Clarke <[log in to unmask]>

Mon, 12 Jun 2017 10:54:28 -0400

125 lines

New Thread

Dose Weighting of Unequal Dose Movie

Dose Weighting of Unequal Dose Movie

Huy Bui <[log in to unmask]>

Fri, 2 Jun 2017 14:31:00 -0400

37 lines

New Thread

EMBL-EBI user survey

EMBL-EBI user survey

Gerard Kleywegt <[log in to unmask]>

Tue, 27 Jun 2017 11:06:48 +0100

33 lines

New Thread

Error running Motioncor2 from Relion 2 GUI

Error running Motioncor2 from Relion 2 GUI

Yehuda Halfon <[log in to unmask]>

Wed, 28 Jun 2017 10:09:47 +0000

70 lines

Re: Error running Motioncor2 from Relion 2 GUI

Matthew Belousoff <[log in to unmask]>

Thu, 29 Jun 2017 09:42:38 +1000

152 lines

Re: Error running Motioncor2 from Relion 2 GUI

Matthew Belousoff <[log in to unmask]>

Thu, 29 Jun 2017 09:45:06 +1000

228 lines

New Thread

ESRF-SANOFI joint PhD position in cryo EM; Grenoble France

ESRF-SANOFI joint PhD position in cryo EM; Grenoble France

guy schoehn <[log in to unmask]>

Fri, 2 Jun 2017 13:23:22 +0200

200 lines

New Thread

Facility Manager position - London - Deadline Approaching

Facility Manager position - London - Deadline Approaching

Zhang, Xiaodong <[log in to unmask]>

Tue, 13 Jun 2017 06:35:32 +0000

249 lines

New Thread

from Appion to Relion

from Appion to Relion

Sonya James <[log in to unmask]>

Wed, 28 Jun 2017 10:25:52 +0100

1324 lines

Re: from Appion to Relion

Yong Zi Tan <[log in to unmask]>

Wed, 28 Jun 2017 20:17:00 +0000

1353 lines

New Thread

gctf vs ctffind and resolution

gctf vs ctffind and resolution

Chiara Rapisarda <[log in to unmask]>

Wed, 14 Jun 2017 14:09:21 +0200

56 lines

Re: gctf vs ctffind and resolution

Sjors Scheres <[log in to unmask]>

Wed, 14 Jun 2017 15:08:42 +0100

51 lines

New Thread

Instrumental Resolution versus Results Resolution

Instrumental Resolution versus Results Resolution

Marin van Heel <[log in to unmask]>

Sat, 24 Jun 2017 10:50:44 +0200

264 lines

New Thread

Job Offer: Structural Biologist-Membrane Proteins, Vertex Pharmaceuticals UK

Job Offer: Structural Biologist-Membrane Proteins, Vertex Pharmaceuticals UK

Christopher Browning <[log in to unmask]>

Fri, 2 Jun 2017 10:01:00 +0000

337 lines

New Thread

Joint CCP-EM & CCP-BioSim Workshop on EM & MD @University of Leeds

Joint CCP-EM & CCP-BioSim Workshop on EM & MD @University of Leeds

Tom Burnley <[log in to unmask]>

Mon, 19 Jun 2017 15:15:54 +0100

214 lines

New Thread

Joint CCP-EM & CCP-BioSim Workshop on EM & MD @University of Leeds 13/14th July

Joint CCP-EM & CCP-BioSim Workshop on EM & MD @University of Leeds 13/14th July

Tom Burnley <[log in to unmask]>

Thu, 29 Jun 2017 16:25:55 +0100

179 lines

New Thread

Kendrew Symposium, 16-17 Nov 2017, EMBL Heidelberg, Germany

Kendrew Symposium, 16-17 Nov 2017, EMBL Heidelberg, Germany

Carsten Sachse <[log in to unmask]>

Tue, 27 Jun 2017 08:37:03 +0200

96 lines

New Thread

LIVESTREAMING: Cryo-EM Symposium, 6-7 July 2017, Grenoble, France

LIVESTREAMING: Cryo-EM Symposium, 6-7 July 2017, Grenoble, France

Montse SOLER LOPEZ <[log in to unmask]>

Fri, 30 Jun 2017 17:56:30 +0200

153 lines

Re: LIVESTREAMING: Cryo-EM Symposium, 6-7 July 2017, Grenoble, France

Yehuda Halfon <[log in to unmask]>

Fri, 30 Jun 2017 15:59:15 +0000

159 lines

New Thread

low-pass filter implemented in RELION

low-pass filter implemented in RELION

SUBSCRIBE CCPEM Naoto Takano <[log in to unmask]>

Fri, 2 Jun 2017 01:19:37 +0100

19 lines

Re: low-pass filter implemented in RELION

Sjors Scheres <[log in to unmask]>

Fri, 2 Jun 2017 09:25:45 +0100

47 lines

Re: low-pass filter implemented in RELION

Sjors Scheres <[log in to unmask]>

Fri, 2 Jun 2017 14:48:03 +0100

52 lines

New Thread

Masks for focussed refinement

Masks for focussed refinement

Michele Lunelli <[log in to unmask]>

Wed, 7 Jun 2017 19:00:48 +0200

49 lines

New Thread

Methods developer post at York, UK

Methods developer post at York, UK

Kevin Cowtan <[log in to unmask]>

Mon, 12 Jun 2017 15:06:38 +0100

70 lines

New Thread

Minimum standards for FSC reporting?

Re: Minimum standards for FSC reporting?

Marin van Heel <[log in to unmask]>

Mon, 12 Jun 2017 11:59:07 +0200

344 lines

Re: Minimum standards for FSC reporting?

Sjors Scheres <[log in to unmask]>

Mon, 12 Jun 2017 13:23:04 +0100

343 lines

Re: Minimum standards for FSC reporting?

Marin van Heel <[log in to unmask]>

Tue, 13 Jun 2017 22:29:06 +0200

1941 lines

New Thread

Model bias in 3D autorefine

Model bias in 3D autorefine

Schulz, Eike-Christian <[log in to unmask]>

Wed, 28 Jun 2017 03:39:36 +0000

30 lines

Re: Model bias in 3D autorefine

Sjors Scheres <[log in to unmask]>

Wed, 28 Jun 2017 09:22:12 +0100

77 lines

Re: Model bias in 3D autorefine

Schulz, Eike-Christian <[log in to unmask]>

Wed, 28 Jun 2017 19:43:38 +0000

85 lines

New Thread

motioncor2 error:

motioncor2 error:

Dieter Blaas <[log in to unmask]>

Tue, 20 Jun 2017 13:23:37 +0200

60 lines

New Thread

Motioncorr 2.1

Motioncorr 2.1

Yehuda Halfon <[log in to unmask]>

Wed, 7 Jun 2017 18:29:23 +0000

36 lines

New Thread

MPI problems with Relion 2.1 on Ubuntu 16.0.4.2 LTS

MPI problems with Relion 2.1 on Ubuntu 16.0.4.2 LTS

John Heumann <[log in to unmask]>

Wed, 21 Jun 2017 16:35:54 +0100

61 lines

Re: MPI problems with Relion 2.1 on Ubuntu 16.0.4.2 LTS

Oliver Clarke <[log in to unmask]>

Wed, 21 Jun 2017 11:38:30 -0400

74 lines

Re: MPI problems with Relion 2.1 on Ubuntu 16.0.4.2 LTS

John Heumann <[log in to unmask]>

Wed, 21 Jun 2017 09:45:54 -0600

65 lines

Re: MPI problems with Relion 2.1 on Ubuntu 16.0.4.2 LTS

Sjors Scheres <[log in to unmask]>

Wed, 21 Jun 2017 17:15:35 +0100

53 lines

Re: MPI problems with Relion 2.1 on Ubuntu 16.0.4.2 LTS

John Heumann <[log in to unmask]>

Wed, 21 Jun 2017 11:15:09 -0600

122 lines

Re: MPI problems with Relion 2.1 on Ubuntu 16.0.4.2 LTS

Joshua Lobo <[log in to unmask]>

Wed, 21 Jun 2017 13:39:38 -0400

220 lines

Re: MPI problems with Relion 2.1 on Ubuntu 16.0.4.2 LTS

John Heumann <[log in to unmask]>

Wed, 21 Jun 2017 11:44:51 -0600

145 lines

Re: MPI problems with Relion 2.1 on Ubuntu 16.0.4.2 LTS

John Heumann <[log in to unmask]>

Wed, 21 Jun 2017 12:46:04 -0600

28 lines

Re: MPI problems with Relion 2.1 on Ubuntu 16.0.4.2 LTS

Sjors Scheres <[log in to unmask]>

Wed, 21 Jun 2017 20:06:32 +0100

114 lines

Re: MPI problems with Relion 2.1 on Ubuntu 16.0.4.2 LTS

Sjors Scheres <[log in to unmask]>

Wed, 21 Jun 2017 20:08:42 +0100

162 lines

Re: MPI problems with Relion 2.1 on Ubuntu 16.0.4.2 LTS

John Heumann <[log in to unmask]>

Wed, 21 Jun 2017 13:20:11 -0600

83 lines

New Thread

postdoc position in C. difficile structural biology

postdoc position in C. difficile structural biology

Per Bullough <[log in to unmask]>

Mon, 19 Jun 2017 13:33:05 +0100

154 lines

New Thread

Postdoctoral Position Available: CNPEM (Campinas, Brazil)

Postdoctoral Position Available: CNPEM (Campinas, Brazil)

Marin van Heel <[log in to unmask]>

Thu, 1 Jun 2017 15:09:06 +0200

1256 lines

New Thread

Postdoctoral position in cryoEM, University of Manchester

Postdoctoral position in cryoEM, University of Manchester

Alan Roseman <[log in to unmask]>

Tue, 27 Jun 2017 10:03:03 +0000

194 lines

New Thread

Postdoctoral position in structural biology at the Wellcome Centre for Cell Biology, Edinburgh, UK

Postdoctoral position in structural biology at the Wellcome Centre for Cell Biology, Edinburgh, UK

ARULANANDAM Jeyaprakash <[log in to unmask]>

Wed, 7 Jun 2017 09:31:49 +0000

233 lines

New Thread

Postdoctoral position in time-resolved EM at the University of Leeds

Postdoctoral position in time-resolved EM at the University of Leeds

Stephen Muench <[log in to unmask]>

Thu, 8 Jun 2017 12:48:43 +0100

41 lines

New Thread

Problem with relion 2.1-beta and chimera 1.11.2

Problem with relion 2.1-beta and chimera 1.11.2

Jean-Christophe Taveau <[log in to unmask]>

Wed, 14 Jun 2017 09:31:21 +0100

27 lines

New Thread

PSI / CCP4 Workshop "3D Electron Crystallography for Macromolecular Compounds"

PSI / CCP4 Workshop "3D Electron Crystallography for Macromolecular Compounds"

Tim Gruene <[log in to unmask]>

Fri, 30 Jun 2017 13:58:55 +0200

84 lines

New Thread

random_seed option in 2Dclassification

random_seed option in 2Dclassification

Joshua Lobo <[log in to unmask]>

Sat, 17 Jun 2017 19:18:08 +0100

22 lines

New Thread

Release of the latest version of SPHIRE

Release of the latest version of SPHIRE

Stefan Raunser <[log in to unmask]>

Tue, 6 Jun 2017 20:51:43 +0000

278 lines

New Thread

Relion 2.0 Helical 3D classification error

Relion 2.0 Helical 3D classification error

Hamidreza Rahmani <[log in to unmask]>

Mon, 19 Jun 2017 20:56:27 +0100

42 lines

New Thread

Relion 2.0stable Helical 3D classification error

Relion 2.0stable Helical 3D classification error

Hamidreza Rahmani <[log in to unmask]>

Thu, 15 Jun 2017 21:40:15 +0100

40 lines

New Thread

Relion 2.1 on multiple GPU nodes

Relion 2.1 on multiple GPU nodes

Juha Huiskonen <[log in to unmask]>

Mon, 26 Jun 2017 19:32:45 +0100

54 lines

Re: Relion 2.1 on multiple GPU nodes

Bjoern Forsberg <[log in to unmask]>

Mon, 26 Jun 2017 22:31:23 +0200

143 lines

New Thread

relion 2.1-beta make -j error

relion 2.1-beta make -j error

Schulz, Eike-Christian <[log in to unmask]>

Thu, 29 Jun 2017 15:10:34 +0000

144 lines

Re: relion 2.1-beta make -j error

Erik Lindahl <[log in to unmask]>

Thu, 29 Jun 2017 09:16:58 -0600

190 lines

New Thread

Relion error launching GUI (new version)

Relion error launching GUI (new version)

Oliver Clarke <[log in to unmask]>

Thu, 8 Jun 2017 00:55:16 +0200

25 lines

Re: Relion error launching GUI (new version)

Sjors Scheres <[log in to unmask]>

Thu, 8 Jun 2017 10:13:30 +0100

42 lines

New Thread

Relion Extraction error

Relion Extraction error

Elena Zehr <[log in to unmask]>

Thu, 15 Jun 2017 04:33:17 +0100

25 lines

Re: Relion Extraction error

Sjors Scheres <[log in to unmask]>

Thu, 15 Jun 2017 06:22:20 +0100

42 lines

Re: Relion Extraction error

Elena Zehr <[log in to unmask]>

Thu, 15 Jun 2017 11:54:02 +0100

19 lines

Re: Relion Extraction error

Elena Zehr <[log in to unmask]>

Thu, 15 Jun 2017 08:48:13 -0400

72 lines

New Thread

RELION movie processing - typical raw particle tracks?

RELION movie processing - typical raw particle tracks?

Oliver Clarke <[log in to unmask]>

Thu, 22 Jun 2017 14:36:44 -0400

2080 lines

Re: RELION movie processing - typical raw particle tracks?

Sjors Scheres <[log in to unmask]>

Fri, 23 Jun 2017 09:08:40 +0100

74 lines

New Thread

Relion particle subtraction > uniformly gray image in 'File Display'

Relion particle subtraction > uniformly gray image in 'File Display'

Dieter Blaas <[log in to unmask]>

Fri, 23 Jun 2017 05:28:01 +0200

37 lines

New Thread

relion-2.1-beta

relion-2.1-beta

Sjors Scheres <[log in to unmask]>

Fri, 9 Jun 2017 15:11:14 +0100

38 lines

Re: relion-2.1-beta

Sjors Scheres <[log in to unmask]>

Sat, 10 Jun 2017 09:34:45 +0100

58 lines

New Thread

relion-2.1-beta-0: 'Sort' crashes when run on particles from Class2D

relion-2.1-beta-0: 'Sort' crashes when run on particles from Class2D

Dieter Blaas <[log in to unmask]>

Mon, 26 Jun 2017 14:09:18 +0200

55 lines

New Thread

Relion21 Tutorial : WARNING: skipping, since cannot get CTF values for

Relion21 Tutorial : WARNING: skipping, since cannot get CTF values for

Benoist LAURENT <[log in to unmask]>

Fri, 23 Jun 2017 12:21:36 +0200

80 lines

Re: Relion21 Tutorial : WARNING: skipping, since cannot get CTF values for

Sjors Scheres <[log in to unmask]>

Fri, 23 Jun 2017 12:26:01 +0100

88 lines

Re: Relion21 Tutorial : WARNING: skipping, since cannot get CTF values for

Benoist LAURENT <[log in to unmask]>

Mon, 26 Jun 2017 11:05:35 +0200

138 lines

Re: Relion21 Tutorial : WARNING: skipping, since cannot get CTF values for

Sjors Scheres <[log in to unmask]>

Mon, 26 Jun 2017 12:19:14 +0100

144 lines

Re: Relion21 Tutorial : WARNING: skipping, since cannot get CTF values for

Benoist LAURENT <[log in to unmask]>

Mon, 26 Jun 2017 13:47:52 +0200

170 lines

Re: Relion21 Tutorial : WARNING: skipping, since cannot get CTF values for

Sjors Scheres <[log in to unmask]>

Mon, 26 Jun 2017 17:23:15 +0100

167 lines

Re: Relion21 Tutorial : WARNING: skipping, since cannot get CTF values for

Gregory Alushin <[log in to unmask]>

Mon, 26 Jun 2017 16:39:53 +0000

150 lines

New Thread

relion_preprocess gives empty black particles when using ctf options

relion_preprocess gives empty black particles when using ctf options

Ambroise Desfosses <[log in to unmask]>

Tue, 20 Jun 2017 18:07:22 +0100

47 lines

Re: relion_preprocess gives empty black particles when using ctf options

Sjors Scheres <[log in to unmask]>

Wed, 21 Jun 2017 09:14:57 +0100

59 lines

Re: relion_preprocess gives empty black particles when using ctf options

Ambroise Desfosses <[log in to unmask]>

Wed, 21 Jun 2017 10:26:19 +0200

69 lines

Re: relion_preprocess gives empty black particles when using ctf options

Sjors Scheres <[log in to unmask]>

Wed, 21 Jun 2017 11:54:52 +0100

88 lines

New Thread

relion_reconstruct for subtomogram data

relion_reconstruct for subtomogram data

Qiang Guo <[log in to unmask]>

Fri, 9 Jun 2017 15:54:47 +0200

154 lines

Re: relion_reconstruct for subtomogram data

Sjors Scheres <[log in to unmask]>

Fri, 9 Jun 2017 15:14:03 +0100

102 lines

Re: relion_reconstruct for subtomogram data

Sjors Scheres <[log in to unmask]>

Fri, 9 Jun 2017 15:44:25 +0100

137 lines

New Thread

Reminder: cryo-EM conference in Bonn (Germany)

Reminder: cryo-EM conference in Bonn (Germany)

Elmar Behrmann <[log in to unmask]>

Tue, 27 Jun 2017 06:43:23 +0000

487 lines

New Thread

Remove over-represented orientations

Remove over-represented orientations

Rémi Fronzes <[log in to unmask]>

Fri, 9 Jun 2017 11:57:23 +0200

13058 lines

Re: Remove over-represented orientations

Sjors Scheres <[log in to unmask]>

Fri, 9 Jun 2017 11:07:36 +0100

71 lines

Re: Remove over-represented orientations

Rémi Fronzes <[log in to unmask]>

Fri, 9 Jun 2017 12:12:58 +0200

196 lines

New Thread

Sampling of local resolution with symmetry?

Sampling of local resolution with symmetry?

Ricardo Righetto <[log in to unmask]>

Fri, 2 Jun 2017 22:29:47 +0200

63 lines

Re: Sampling of local resolution with symmetry?

Sjors Scheres <[log in to unmask]>

Tue, 6 Jun 2017 12:29:28 +0100

58 lines

Re: Sampling of local resolution with symmetry?

Ricardo Righetto <[log in to unmask]>

Tue, 6 Jun 2017 17:50:42 +0200

164 lines

New Thread

scipion graphing of ctf estimation from the logs

scipion graphing of ctf estimation from the logs

Joshua Lobo <[log in to unmask]>

Wed, 21 Jun 2017 18:14:23 +0100

23 lines

Re: scipion graphing of ctf estimation from the logs

Jose Miguel de la Rosa Trevin <[log in to unmask]>

Wed, 21 Jun 2017 19:17:38 +0200

66 lines

New Thread

SGD in RELION-2.1-beta not utilizing GPU's

SGD in RELION-2.1-beta not utilizing GPU's

Tom Laughlin <[log in to unmask]>

Thu, 15 Jun 2017 07:38:37 +0100

20 lines

New Thread

Solvent masks and reference in relion_refine

Solvent masks and reference in relion_refine

Michele Lunelli <[log in to unmask]>

Wed, 14 Jun 2017 10:20:35 +0200

40 lines

Re: Solvent masks and reference in relion_refine

Sjors Scheres <[log in to unmask]>

Wed, 14 Jun 2017 15:09:51 +0100

42 lines

New Thread

SPHIRE Workshop. Bonn, 11-12 Sept

SPHIRE Workshop. Bonn, 11-12 Sept

Dr. Christos Gatsogiannis <[log in to unmask]>

Fri, 9 Jun 2017 10:51:56 +0000

150 lines

New Thread

Super-res plus lower mag to improve CTF correction?

Super-res plus lower mag to improve CTF correction?

Oliver Clarke <[log in to unmask]>

Fri, 16 Jun 2017 16:41:23 -0400

6449 lines

Re: Super-res plus lower mag to improve CTF correction?

Kaelber, Jason <[log in to unmask]>

Fri, 16 Jun 2017 21:17:36 +0000

6529 lines

Re: Super-res plus lower mag to improve CTF correction?

Oliver Clarke <[log in to unmask]>

Fri, 16 Jun 2017 17:27:55 -0400

200 lines

Re: Super-res plus lower mag to improve CTF correction?

Reza Khayat <[log in to unmask]>

Sat, 17 Jun 2017 01:41:49 +0000

93 lines

Re: Super-res plus lower mag to improve CTF correction?

Oliver Clarke <[log in to unmask]>

Fri, 16 Jun 2017 22:38:49 -0400

102 lines

Re: Super-res plus lower mag to improve CTF correction?

Edoardo D'Imprima <[log in to unmask]>

Sat, 17 Jun 2017 16:46:48 +0200

69 lines

Re: Super-res plus lower mag to improve CTF correction?

Edoardo D'Imprima <[log in to unmask]>

Sat, 17 Jun 2017 16:46:10 +0200

45 lines

New Thread

Tenure Track Positions at University of Leeds

Tenure Track Positions at University of Leeds

Neil Ranson <[log in to unmask]>

Fri, 2 Jun 2017 09:22:13 +0000

157 lines

New Thread

The CompBioMed Newsletter, Issue No.1, May 2017

The CompBioMed Newsletter, Issue No.1, May 2017

Pragna Kiri <[log in to unmask]>

Tue, 6 Jun 2017 17:54:42 +0100

55089 lines

New Thread

The Francis Crick Electron Microscopy Opening Symposium, London July 12th - 14th 2017 - Registration closes this Wednesday 21st June

The Francis Crick Electron Microscopy Opening Symposium, London July 12th - 14th 2017 - Registration closes this Wednesday 21st June

Raffaella Carzaniga <[log in to unmask]>

Mon, 19 Jun 2017 21:41:37 +0000

142 lines

New Thread

Tilted 2D classification results

Tilted 2D classification results

Adrian Koh Fujiet <[log in to unmask]>

Wed, 7 Jun 2017 14:54:23 +0800

3531 lines

New Thread

unusual CTF

unusual CTF

Miguel Zamora <[log in to unmask]>

Fri, 23 Jun 2017 11:33:30 +0100

2953 lines

Re: unusual CTF

Sjors Scheres <[log in to unmask]>

Fri, 23 Jun 2017 12:29:55 +0100

39 lines

Re: unusual CTF

Miguel Zamora <[log in to unmask]>

Mon, 26 Jun 2017 11:22:21 +0100

16 lines

New Thread

use of GUI

use of GUI

Sjors Scheres <[log in to unmask]>

Mon, 19 Jun 2017 08:26:56 +0100

42 lines

Re: use of GUI

Gabriel Lander <[log in to unmask]>

Mon, 19 Jun 2017 00:36:04 -0700

59 lines

Re: use of GUI

Sjors Scheres <[log in to unmask]>

Mon, 19 Jun 2017 12:23:59 +0100

64 lines

Re: use of GUI

Oliver Clarke <[log in to unmask]>

Mon, 19 Jun 2017 09:14:42 -0400

72 lines

Re: use of GUI

Eric Tse <[log in to unmask]>

Mon, 19 Jun 2017 09:29:47 -0400

189 lines

Re: use of GUI

Sjors Scheres <[log in to unmask]>

Mon, 19 Jun 2017 14:48:56 +0100

72 lines

Re: use of GUI

Oliver Clarke <[log in to unmask]>

Mon, 19 Jun 2017 09:51:01 -0400

100 lines

Re: use of GUI

Oliver Clarke <[log in to unmask]>

Mon, 19 Jun 2017 09:52:18 -0400

107 lines

Re: use of GUI

Wolfgang Lugmayr <[log in to unmask]>

Mon, 19 Jun 2017 15:58:13 +0200

83 lines

Re: use of GUI

Dimitry Tegunov <[log in to unmask]>

Mon, 19 Jun 2017 15:49:37 +0100

23 lines

Re: use of GUI

Ambroise Desfosses <[log in to unmask]>

Tue, 20 Jun 2017 17:29:42 +0100

44 lines

Re: use of GUI

Jose Miguel de la Rosa Trevin <[log in to unmask]>

Tue, 20 Jun 2017 18:45:21 +0200

157 lines

Re: use of GUI

Juha Huiskonen <[log in to unmask]>

Tue, 20 Jun 2017 17:54:05 +0100

184 lines

Re: use of GUI

Ambroise Desfosses <[log in to unmask]>

Tue, 20 Jun 2017 19:03:43 +0200

265 lines

Re: use of GUI

Sjors Scheres <[log in to unmask]>

Wed, 21 Jun 2017 08:17:17 +0100

84 lines

Re: use of GUI

Jose Miguel de la Rosa Trevin <[log in to unmask]>

Wed, 21 Jun 2017 16:23:37 +0200

4706 lines

Re: use of GUI

Oliver Clarke <[log in to unmask]>

Wed, 21 Jun 2017 12:05:41 -0400

349 lines

Re: use of GUI

Jose Miguel de la Rosa Trevin <[log in to unmask]>

Wed, 21 Jun 2017 18:37:28 +0200

371 lines

Re: use of GUI

Oliver Clarke <[log in to unmask]>

Wed, 21 Jun 2017 13:16:42 -0400

448 lines

New Thread

VPP high magnification dataset doesn't refine past 4 Angstrom

VPP high magnification dataset doesn't refine past 4 Angstrom

Liz Kellogg <[log in to unmask]>

Wed, 28 Jun 2017 22:26:55 -0700

914 lines

Re: VPP high magnification dataset doesn't refine past 4 Angstrom

Lars-Anders Carlson <[log in to unmask]>

Thu, 29 Jun 2017 19:22:23 +0200

82 lines

Re: VPP high magnification dataset doesn't refine past 4 Angstrom

Alexis Rohou <[log in to unmask]>

Thu, 29 Jun 2017 10:54:15 -0700

149 lines

Re: VPP high magnification dataset doesn't refine past 4 Angstrom

Dimitry Tegunov <[log in to unmask]>

Thu, 29 Jun 2017 22:19:40 +0100

16 lines

New Thread

We have release Scipion v1.1 with new Xmipp methods

We have release Scipion v1.1 with new Xmipp methods

Pablo Conesa <[log in to unmask]>

Thu, 15 Jun 2017 12:05:36 +0200

279 lines

Re: We have release Scipion v1.1 with new Xmipp methods

Hoover , David (NIH/CIT) [E] <[log in to unmask]>

Thu, 15 Jun 2017 12:55:34 -0400

20 lines

Re: We have release Scipion v1.1 with new Xmipp methods

Grigory Sharov <[log in to unmask]>

Thu, 15 Jun 2017 18:41:57 +0100

87 lines

Re: We have release Scipion v1.1 with new Xmipp methods

Alexis Rohou <[log in to unmask]>

Thu, 15 Jun 2017 11:56:11 -0600

174 lines

Re: We have release Scipion v1.1 with new Xmipp methods

Grigory Sharov <[log in to unmask]>

Thu, 15 Jun 2017 19:27:17 +0100

229 lines

Re: We have release Scipion v1.1 with new Xmipp methods

Hoover , David (NIH/CIT) [E] <[log in to unmask]>

Thu, 15 Jun 2017 15:42:23 -0400

219 lines

Re: We have release Scipion v1.1 with new Xmipp methods

Jose Miguel de la Rosa Trevin <[log in to unmask]>

Thu, 15 Jun 2017 21:52:43 +0200

202 lines

Re: We have release Scipion v1.1 with new Xmipp methods

Grigory Sharov <[log in to unmask]>

Thu, 15 Jun 2017 21:05:26 +0100

260 lines

Re: We have release Scipion v1.1 with new Xmipp methods

Hoover , David (NIH/CIT) [E] <[log in to unmask]>

Thu, 15 Jun 2017 16:09:34 -0400

345 lines

Re: We have release Scipion v1.1 with new Xmipp methods

Jose Miguel de la Rosa Trevin <[log in to unmask]>

Thu, 15 Jun 2017 22:09:54 +0200

281 lines

New Thread

[3dem] Postdoctoral Position Available: CNPEM (Campinas, Brazil) REMINDER

[3dem] Postdoctoral Position Available: CNPEM (Campinas, Brazil) REMINDER

Marin van Heel <[log in to unmask]>

Thu, 22 Jun 2017 18:10:50 +0200

1271 lines

New Thread

[3dem] [ccpem] Minimum standards for FSC reporting?

Re: [3dem] [ccpem] Minimum standards for FSC reporting?

Marin van Heel <[log in to unmask]>

Mon, 12 Jun 2017 11:59:07 +0200

233 lines

Re: [3dem] [ccpem] Minimum standards for FSC reporting?

Steven Ludtke <[log in to unmask]>

Mon, 12 Jun 2017 12:21:37 +0200

787 lines

Re: [3dem] [ccpem] Minimum standards for FSC reporting?

Steven Ludtke <[log in to unmask]>

Mon, 12 Jun 2017 12:21:37 +0200

803 lines

Re: [3dem] [ccpem] Minimum standards for FSC reporting?

Sjors Scheres <[log in to unmask]>

Mon, 12 Jun 2017 13:23:04 +0100

402 lines

Re: [3dem] [ccpem] Minimum standards for FSC reporting?

Marin van Heel <[log in to unmask]>

Tue, 13 Jun 2017 22:29:06 +0200

1959 lines

New Thread

[3dem] [TEM] CTF and SNR

Re: [3dem] [TEM] CTF and SNR

Marin van Heel <[log in to unmask]>

Fri, 9 Jun 2017 10:57:18 +0100

474 lines

Re: [3dem] [TEM] CTF and SNR

Marin van Heel <[log in to unmask]>

Fri, 9 Jun 2017 18:48:04 +0100

730 lines

Re: [3dem] [TEM] CTF and SNR

Marin van Heel <[log in to unmask]>

Fri, 9 Jun 2017 18:48:04 +0100

747 lines

Re: [3dem] [TEM] CTF and SNR

Marin van Heel <[log in to unmask]>

Sat, 10 Jun 2017 08:29:49 +0100

899 lines

Re: [3dem] [TEM] CTF and SNR

Marin van Heel <[log in to unmask]>

Sat, 10 Jun 2017 08:29:49 +0100

916 lines

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