JiscMail Logo
Email discussion lists for the UK Education and Research communities

Help for CCPEM Archives


CCPEM Archives

CCPEM Archives


April 2017


View:

Show Author | Hide Author
Show Table of Contents | Hide Table of Contents

 

Table of Contents:

2 Wellcome Trust funded Post-Doc positions (4y) available in Berger group, University of Bristol, UK (1 message)
25th PSDI 12th-14th Nov 2017 Cambridge UK (1 message)
3D classification of Relion stalling in "maximization" step (1 message)
CCP-EM Spring Symposium (2 messages)
CCP-EM Spring Symposium - Live Stream (1 message)
cffind4 wrapper in relion 2.0.5 (1 message)
CLAHE pre-processing for Relion analysis (2 messages)
Collapsing of 2D Class averages (4 messages)
Conference on Methods and applications in the frontier between MX and CryoEM. (3 messages)
Covert tiff to mrc in Relion (3 messages)
Cryo-EM scientist position at Merck & Co., Inc. - NJ - USA (1 message)
cryoEM conference Bonn (Germany) Sept2017 (1 message)
CTF Final Resolution and CTF FOM using GCTF (1 message)
Deleted Relion job history (2 messages)
Focussed refinement with Relion (4 messages)
Institut Pasteur Course on Integrative Structural Biology 2017 : deadline extension (2 messages)
Join the editorial team of IUCr Journals (1 message)
Many thanks (2 messages)
monitoring of GPU usage in 3D classifications (5 messages)
Motion Correction of Low Dose Datasets (3 messages)
MPI errors during 3D autorefine in Relion (1 message)
Particle Polishing for sub-megadalton structures (1 message)
PhD positions, Biozentrum-UniBasel (1 message)
PhD studentship on cryoEM data analysis (1 message)
Postdoctoral Research Position MRC Laboratory of Molecular Biology (1 message)
Registration now open for the 5th Annual CCPBioSim Conference (1 message)
Relion 2.0.5 centos Import output message window (1 message)
Relion 2D classification error (2 messages)
Relion 3D auto refine does not converge beyond initial low-pass filter (2 messages)
relion on CUDA 2.0 GPUs? (3 messages)
Relion Refine3D error (1 message)
relion-2: transfer project from one machine to another one (5 messages)
relion2.0.6 - potential issue? (1 message)
relion2.05: "ERROR: FSC curve never drops below randomize_fsc_at. You may want to check your mask". (5 messages)
Relion2: Refine3D gets stuck at iteration 2 (1 message)
REMINDER: THIS THURSDAY: Cloud and High Performance Computing in Biomedicine, UCL, London, 27 April 2017 (1 message)
save star with selected images in relion 2.0 (2 messages)
Scientific Computing Specialist position at RU (1 message)
SECOND ANNOUNCEMENT: Cryo-EM Symposium, 6-7 July 2017, European Photon & Neutron Campus, Grenoble, France (1 message)
Senior Software Scientist (informatics) position at Diamond Light Source (1 message)
single particle reconstruction with tilts (3 messages)
Sphire sx3dvariability (2 messages)
Sphire sx3dvariability -important note (6 messages)
SuRVoS Training Workshop, May 4-5, 2017 at Diamond Light Source (1 message)
Using particles from several micrographs (3 messages)
Using Relion to process Tomography Data (3 messages)
Using RELION with GPUs on multiple compute nodes (2 messages)

LISTSERV Archives

LISTSERV Archives

CCPEM Home

CCPEM Home

Options

Subscribe or Unsubscribe

Subscribe or Unsubscribe

Log In

Log In

Get Password

Get Password

Subject Sorted by Subject, Chronologically

From

Date

Size

New Thread

2 Wellcome Trust funded Post-Doc positions (4y) available in Berger group, University of Bristol, UK

2 Wellcome Trust funded Post-Doc positions (4y) available in Berger group, University of Bristol, UK

kapil gupta <[log in to unmask]>

Wed, 12 Apr 2017 17:33:00 +0100

182 lines

New Thread

25th PSDI 12th-14th Nov 2017 Cambridge UK

25th PSDI 12th-14th Nov 2017 Cambridge UK

Pamela Williams <[log in to unmask]>

Thu, 27 Apr 2017 16:17:40 +0100

35 lines

New Thread

3D classification of Relion stalling in "maximization" step

3D classification of Relion stalling in "maximization" step

Coudray, Nicolas <[log in to unmask]>

Tue, 4 Apr 2017 14:53:09 +0000

161 lines

New Thread

CCP-EM Spring Symposium

CCP-EM Spring Symposium

Tom Burnley <[log in to unmask]>

Tue, 25 Apr 2017 09:54:45 +0100

2006 lines

Re: CCP-EM Spring Symposium

Joshua Lobo <[log in to unmask]>

Wed, 26 Apr 2017 10:10:25 -0500

108 lines

New Thread

CCP-EM Spring Symposium - Live Stream

CCP-EM Spring Symposium - Live Stream

Tom Burnley <[log in to unmask]>

Wed, 26 Apr 2017 09:52:33 +0100

186 lines

New Thread

cffind4 wrapper in relion 2.0.5

cffind4 wrapper in relion 2.0.5

Joshua Lobo <[log in to unmask]>

Thu, 27 Apr 2017 23:05:25 +0100

44 lines

New Thread

CLAHE pre-processing for Relion analysis

CLAHE pre-processing for Relion analysis

Schulz, Eike-Christian <[log in to unmask]>

Mon, 24 Apr 2017 19:30:53 +0000

63 lines

Re: CLAHE pre-processing for Relion analysis

Sjors Scheres <[log in to unmask]>

Tue, 25 Apr 2017 09:02:30 +0100

35 lines

New Thread

Collapsing of 2D Class averages

Collapsing of 2D Class averages

Ali Khan <[log in to unmask]>

Mon, 3 Apr 2017 20:39:46 +0100

21 lines

Re: Collapsing of 2D Class averages

Carlos Oscar Sorzano <[log in to unmask]>

Mon, 3 Apr 2017 22:23:18 +0200

58 lines

Re: Collapsing of 2D Class averages

Sjors Scheres <[log in to unmask]>

Sat, 15 Apr 2017 09:35:21 +0100

39 lines

Re: Collapsing of 2D Class averages

Ali Khan <[log in to unmask]>

Sat, 15 Apr 2017 09:22:21 -0400

49 lines

New Thread

Conference on Methods and applications in the frontier between MX and CryoEM.

Conference on Methods and applications in the frontier between MX and CryoEM.

Garib Murshudov <[log in to unmask]>

Thu, 13 Apr 2017 00:18:57 +0100

182784 lines

Conference on Methods and applications in the frontier between MX and CryoEM.

Garib Murshudov <[log in to unmask]>

Thu, 13 Apr 2017 00:42:16 +0100

101 lines

Conference on Methods and applications in the frontier between MX and CryoEM.

Garib Murshudov <[log in to unmask]>

Tue, 18 Apr 2017 17:06:02 +0100

10175 lines

New Thread

Covert tiff to mrc in Relion

Covert tiff to mrc in Relion

James S. <[log in to unmask]>

Mon, 3 Apr 2017 09:11:53 +0000

245 lines

Re: Covert tiff to mrc in Relion

Alexander Shkumatov <[log in to unmask]>

Mon, 3 Apr 2017 11:25:10 +0200

1164 lines

Re: Covert tiff to mrc in Relion

Dieter Blaas <[log in to unmask]>

Mon, 3 Apr 2017 12:49:18 +0200

1270 lines

New Thread

Cryo-EM scientist position at Merck & Co., Inc. - NJ - USA

Cryo-EM scientist position at Merck & Co., Inc. - NJ - USA

Scapin, Giovanna <[log in to unmask]>

Wed, 12 Apr 2017 15:10:47 +0000

245 lines

New Thread

cryoEM conference Bonn (Germany) Sept2017

cryoEM conference Bonn (Germany) Sept2017

Elmar Behrmann <[log in to unmask]>

Wed, 5 Apr 2017 13:20:16 +0000

146 lines

New Thread

CTF Final Resolution and CTF FOM using GCTF

Re: CTF Final Resolution and CTF FOM using GCTF

Joshua Lobo <[log in to unmask]>

Tue, 4 Apr 2017 11:41:25 -0500

266 lines

New Thread

Deleted Relion job history

Deleted Relion job history

Reza Khayat <[log in to unmask]>

Sat, 15 Apr 2017 16:20:43 +0000

40 lines

Re: Deleted Relion job history

Dari Kimanius <[log in to unmask]>

Sat, 15 Apr 2017 19:52:17 +0200

106 lines

New Thread

Focussed refinement with Relion

Focussed refinement with Relion

Michele Lunelli <[log in to unmask]>

Tue, 4 Apr 2017 17:52:15 +0200

65 lines

Re: Focussed refinement with Relion

Sjors Scheres <[log in to unmask]>

Sun, 16 Apr 2017 13:00:23 +0100

61 lines

Re: Focussed refinement with Relion

Michele Lunelli <[log in to unmask]>

Mon, 24 Apr 2017 18:00:38 +0200

196 lines

Re: Focussed refinement with Relion

Sjors Scheres <[log in to unmask]>

Tue, 25 Apr 2017 09:04:17 +0100

113 lines

New Thread

Institut Pasteur Course on Integrative Structural Biology 2017 : deadline extension

Institut Pasteur Course on Integrative Structural Biology 2017 : deadline extension

Claudine Mayer <[log in to unmask]>

Tue, 25 Apr 2017 14:26:55 +0200

833 lines

Institut Pasteur Course on Integrative Structural Biology 2017 : deadline extension

Claudine MAYER <[log in to unmask]>

Tue, 25 Apr 2017 20:34:45 +0200

831 lines

New Thread

Join the editorial team of IUCr Journals

Join the editorial team of IUCr Journals

Louise Jones <[log in to unmask]>

Fri, 7 Apr 2017 14:49:37 +0100

33 lines

New Thread

Many thanks

Many thanks

Chun-wa Chung <[log in to unmask]>

Mon, 24 Apr 2017 08:50:10 +0000

47 lines

Re: Many thanks

Chun-wa Chung <[log in to unmask]>

Mon, 24 Apr 2017 08:52:04 +0000

31 lines

New Thread

monitoring of GPU usage in 3D classifications

monitoring of GPU usage in 3D classifications

Coudray, Nicolas <[log in to unmask]>

Tue, 18 Apr 2017 22:34:03 +0000

61 lines

Re: monitoring of GPU usage in 3D classifications

Craig Yoshioka <[log in to unmask]>

Tue, 18 Apr 2017 22:37:36 +0000

69 lines

Re: monitoring of GPU usage in 3D classifications

Julian Reitz <[log in to unmask]>

Wed, 19 Apr 2017 09:50:01 +0200

104 lines

Re: monitoring of GPU usage in 3D classifications

Coudray, Nicolas <[log in to unmask]>

Wed, 19 Apr 2017 12:50:38 +0000

130 lines

Re: monitoring of GPU usage in 3D classifications

Sjors Scheres <[log in to unmask]>

Thu, 20 Apr 2017 08:31:27 +0100

132 lines

New Thread

Motion Correction of Low Dose Datasets

Motion Correction of Low Dose Datasets

Joshua Lobo <[log in to unmask]>

Thu, 13 Apr 2017 17:59:24 +0100

22 lines

Re: Motion Correction of Low Dose Datasets

Shawn Zheng <[log in to unmask]>

Thu, 13 Apr 2017 19:23:36 +0000

71 lines

Re: Motion Correction of Low Dose Datasets

Joshua Lobo <[log in to unmask]>

Fri, 14 Apr 2017 13:59:09 -0500

34 lines

New Thread

MPI errors during 3D autorefine in Relion

MPI errors during 3D autorefine in Relion

Ries, Anne <[log in to unmask]>

Tue, 25 Apr 2017 10:53:48 +0000

142 lines

New Thread

Particle Polishing for sub-megadalton structures

Particle Polishing for sub-megadalton structures

Joshua Lobo <[log in to unmask]>

Tue, 18 Apr 2017 20:22:56 +0100

21 lines

New Thread

PhD positions, Biozentrum-UniBasel

PhD positions, Biozentrum-UniBasel

Camilo Perez <[log in to unmask]>

Sat, 1 Apr 2017 11:08:14 +0000

112 lines

New Thread

PhD studentship on cryoEM data analysis

PhD studentship on cryoEM data analysis

Tom Burnley <[log in to unmask]>

Fri, 21 Apr 2017 18:45:52 +0100

79 lines

New Thread

Postdoctoral Research Position MRC Laboratory of Molecular Biology

Postdoctoral Research Position MRC Laboratory of Molecular Biology

Roger Williams <[log in to unmask]>

Tue, 18 Apr 2017 10:45:37 +0100

181 lines

New Thread

Registration now open for the 5th Annual CCPBioSim Conference

Registration now open for the 5th Annual CCPBioSim Conference

Martyn Winn <[log in to unmask]>

Wed, 26 Apr 2017 22:37:57 +0000

121 lines

New Thread

Relion 2.0.5 centos Import output message window

Relion 2.0.5 centos Import output message window

Joshua Lobo <[log in to unmask]>

Wed, 26 Apr 2017 19:30:47 +0100

26 lines

New Thread

Relion 2D classification error

Relion 2D classification error

Sonya James <[log in to unmask]>

Wed, 5 Apr 2017 13:33:19 +0100

28 lines

Re: Relion 2D classification error

Shintaro Aibara <[log in to unmask]>

Wed, 5 Apr 2017 15:01:27 +0200

86 lines

New Thread

Relion 3D auto refine does not converge beyond initial low-pass filter

Relion 3D auto refine does not converge beyond initial low-pass filter

Schulz, Eike-Christian <[log in to unmask]>

Mon, 24 Apr 2017 19:36:42 +0000

76 lines

Re: Relion 3D auto refine does not converge beyond initial low-pass filter

Sjors Scheres <[log in to unmask]>

Tue, 25 Apr 2017 09:01:09 +0100

40 lines

New Thread

relion on CUDA 2.0 GPUs?

relion on CUDA 2.0 GPUs?

Joe Batchelor <[log in to unmask]>

Thu, 13 Apr 2017 09:21:29 -0400

32 lines

Re: relion on CUDA 2.0 GPUs?

Erik Lindahl <[log in to unmask]>

Thu, 13 Apr 2017 16:55:40 +0200

93 lines

Re: relion on CUDA 2.0 GPUs?

Christopher Lilienthal <[log in to unmask]>

Thu, 13 Apr 2017 16:05:57 -0400

108 lines

New Thread

Relion Refine3D error

Relion Refine3D error

Hemanth Kumar Narayana Reddy <[log in to unmask]>

Wed, 19 Apr 2017 09:22:21 +0000

130 lines

New Thread

relion-2: transfer project from one machine to another one

relion-2: transfer project from one machine to another one

Dieter Blaas <[log in to unmask]>

Mon, 3 Apr 2017 10:03:58 +0200

33 lines

Re: relion-2: transfer project from one machine to another one

Wolfgang Lugmayr <[log in to unmask]>

Mon, 3 Apr 2017 13:10:08 +0200

57 lines

Re: relion-2: transfer project from one machine to another one

Dieter Blaas <[log in to unmask]>

Mon, 3 Apr 2017 13:22:33 +0200

87 lines

Re: relion-2: transfer project from one machine to another one

Wolfgang Lugmayr <[log in to unmask]>

Mon, 3 Apr 2017 13:51:55 +0200

93 lines

Re: relion-2: transfer project from one machine to another one

Dieter Blaas <[log in to unmask]>

Mon, 3 Apr 2017 14:08:12 +0200

145 lines

New Thread

relion2.0.6 - potential issue?

relion2.0.6 - potential issue?

Leonid Sazanov <[log in to unmask]>

Mon, 24 Apr 2017 15:39:21 +0100

33 lines

New Thread

relion2.05: "ERROR: FSC curve never drops below randomize_fsc_at. You may want to check your mask".

relion2.05: "ERROR: FSC curve never drops below randomize_fsc_at. You may want to check your mask".

Dieter Blaas <[log in to unmask]>

Thu, 20 Apr 2017 22:38:05 +0200

134 lines

Re: relion2.05: "ERROR: FSC curve never drops below randomize_fsc_at. You may want to check your mask".

Sjors Scheres <[log in to unmask]>

Fri, 21 Apr 2017 13:42:39 +0100

77 lines

Re: relion2.05: "ERROR: FSC curve never drops below randomize_fsc_at. You may want to check your mask".

Dieter Blaas <[log in to unmask]>

Fri, 21 Apr 2017 14:56:10 +0200

94 lines

Re: relion2.05: "ERROR: FSC curve never drops below randomize_fsc_at. You may want to check your mask".

Sjors Scheres <[log in to unmask]>

Mon, 24 Apr 2017 08:17:19 +0100

108 lines

Re: relion2.05: "ERROR: FSC curve never drops below randomize_fsc_at. You may want to check your mask".

Dieter Blaas <[log in to unmask]>

Mon, 24 Apr 2017 09:45:25 +0200

569 lines

New Thread

Relion2: Refine3D gets stuck at iteration 2

Re: Relion2: Refine3D gets stuck at iteration 2

Bjoern Forsberg <[log in to unmask]>

Wed, 5 Apr 2017 10:12:12 +0200

298 lines

New Thread

REMINDER: THIS THURSDAY: Cloud and High Performance Computing in Biomedicine, UCL, London, 27 April 2017

REMINDER: THIS THURSDAY: Cloud and High Performance Computing in Biomedicine, UCL, London, 27 April 2017

Pragna Kiri <[log in to unmask]>

Tue, 25 Apr 2017 15:12:44 +0200

3856 lines

New Thread

save star with selected images in relion 2.0

save star with selected images in relion 2.0

Matteo COLOMBO <[log in to unmask]>

Wed, 5 Apr 2017 15:44:21 +0200

30 lines

Re: save star with selected images in relion 2.0

Julian Reitz <[log in to unmask]>

Wed, 5 Apr 2017 16:02:48 +0200

55 lines

New Thread

Scientific Computing Specialist position at RU

Scientific Computing Specialist position at RU

Gregory Alushin <[log in to unmask]>

Wed, 26 Apr 2017 02:06:28 +0000

379 lines

New Thread

SECOND ANNOUNCEMENT: Cryo-EM Symposium, 6-7 July 2017, European Photon & Neutron Campus, Grenoble, France

SECOND ANNOUNCEMENT: Cryo-EM Symposium, 6-7 July 2017, European Photon & Neutron Campus, Grenoble, France

Montse SOLER LOPEZ <[log in to unmask]>

Fri, 28 Apr 2017 17:24:20 +0200

670 lines

New Thread

Senior Software Scientist (informatics) position at Diamond Light Source

Senior Software Scientist (informatics) position at Diamond Light Source

Alun Ashton <[log in to unmask]>

Mon, 10 Apr 2017 13:03:09 +0000

59 lines

New Thread

single particle reconstruction with tilts

single particle reconstruction with tilts

Ali Khan <[log in to unmask]>

Wed, 5 Apr 2017 17:48:16 +0100

21 lines

Re: single particle reconstruction with tilts

Dmitry Lyumkis <[log in to unmask]>

Wed, 5 Apr 2017 17:05:42 +0000

41 lines

Re: single particle reconstruction with tilts

Ali Khan <[log in to unmask]>

Wed, 5 Apr 2017 13:24:13 -0400

55 lines

New Thread

Sphire sx3dvariability

Sphire sx3dvariability

Reza Khayat <[log in to unmask]>

Mon, 17 Apr 2017 15:37:36 +0000

170 lines

Re: Sphire sx3dvariability

Zack Berndsen <[log in to unmask]>

Tue, 18 Apr 2017 20:27:44 +0000

446 lines

New Thread

Sphire sx3dvariability -important note

Re: Sphire sx3dvariability -important note

Ludtke, Steven J <[log in to unmask]>

Tue, 18 Apr 2017 20:40:33 +0000

503 lines

Re: Sphire sx3dvariability -important note

Zack Berndsen <[log in to unmask]>

Tue, 18 Apr 2017 20:57:48 +0000

625 lines

Re: Sphire sx3dvariability -important note

Ludtke, Steven J <[log in to unmask]>

Wed, 19 Apr 2017 16:38:56 +0000

721 lines

Re: Sphire sx3dvariability -important note

Reza Khayat <[log in to unmask]>

Wed, 19 Apr 2017 17:19:32 +0000

996 lines

Re: Sphire sx3dvariability -important note

Zack Berndsen <[log in to unmask]>

Wed, 19 Apr 2017 18:19:01 +0000

868 lines

Re: Sphire sx3dvariability -important note

Felipe Merino <[log in to unmask]>

Thu, 20 Apr 2017 10:31:52 +0200

1204 lines

New Thread

SuRVoS Training Workshop, May 4-5, 2017 at Diamond Light Source

SuRVoS Training Workshop, May 4-5, 2017 at Diamond Light Source

Michele Darrow <[log in to unmask]>

Mon, 3 Apr 2017 09:49:08 +0000

35518 lines

New Thread

Using particles from several micrographs

Using particles from several micrographs

Sonya James <[log in to unmask]>

Wed, 5 Apr 2017 13:41:05 +0100

20 lines

Re: Using particles from several micrographs

Joshua Lobo <[log in to unmask]>

Wed, 5 Apr 2017 09:24:00 -0500

66 lines

Re: Using particles from several micrographs

Sjors Scheres <[log in to unmask]>

Sun, 16 Apr 2017 12:57:21 +0100

38 lines

New Thread

Using Relion to process Tomography Data

Using Relion to process Tomography Data

Julian Reitz <[log in to unmask]>

Wed, 26 Apr 2017 15:13:37 +0100

41 lines

Re: Using Relion to process Tomography Data

Subramaniam, Sriram (NIH/NCI) [E] <[log in to unmask]>

Wed, 26 Apr 2017 15:20:51 +0000

45 lines

Re: Using Relion to process Tomography Data

Sjors Scheres <[log in to unmask]>

Thu, 27 Apr 2017 19:37:09 +0100

75 lines

New Thread

Using RELION with GPUs on multiple compute nodes

Using RELION with GPUs on multiple compute nodes

Christopher Lilienthal <[log in to unmask]>

Tue, 18 Apr 2017 18:06:36 -0400

25 lines

Re: Using RELION with GPUs on multiple compute nodes

Erik Lindahl <[log in to unmask]>

Wed, 19 Apr 2017 07:52:22 +0200

40 lines

JiscMail Tools


RSS Feeds and Sharing


Advanced Options


Archives

May 2017
April 2017
March 2017
February 2017
January 2017
December 2016
November 2016
October 2016
September 2016
August 2016
July 2016
June 2016
May 2016
April 2016
March 2016
February 2016
January 2016
December 2015
November 2015
October 2015
September 2015
August 2015
July 2015
June 2015
May 2015
April 2015
March 2015
February 2015
January 2015
December 2014
November 2014
October 2014
September 2014
August 2014
July 2014
June 2014
May 2014
April 2014
March 2014
February 2014
January 2014
December 2013
November 2013
October 2013
September 2013
August 2013
July 2013
June 2013
May 2013
April 2013
March 2013
February 2013


WWW.JISCMAIL.AC.UK

Secured by F-Secure Anti-Virus CataList Email List Search Powered by the LISTSERV Email List Manager