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March 2017


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Table of Contents:

'Ready-to-use' Relion-2/GPU workstations (2 messages)
3D reconstruction from negative stain data (4 messages)
A few things I encountered using SSH from my mac (6 messages)
Academic and Research positions in the Leicester Institute of Structural and Chemical Biology (1 message)
accelerate maximization GPU / CPU Relion-2 (2 messages)
Adequate particle normalization prior to 2D classification? (3 messages)
Anisotropic mag correction in MotionCor2: input of distortion angle (1 message)
Box file converstion for helical segments coordinates to start-end coordinates (1 message)
Buying old Open Compute (1 message)
CCP-EM Icknield Workshop for High Resolution Model Building - Reminder (1 message)
Cloud and High Performance Computing in Biomedicine, UCL, London, 27 April 2017 (2 messages)
combining data from two cameras (2 messages)
continuing old jobs in Relion/2.0 (1 message)
Cryo-EM positions at EMBL (1 message)
Cryo-EM symposium, Grenoble 6-7 July 2017 (1 message)
CTF Final Resolution and CTF FOM using GCTF (2 messages)
Deciding Patch Size for MotionCor2 (3 messages)
eBIC and CCP-EM Spring Symposia 24-26th April 2017 - Reminder (1 message)
ERROR: CudaCustomAllocator out of memory (4 messages)
Founders edition vs overclocked GeForce cards (2 messages)
Gctf usage with relion2 (1 message)
geforce vs tesla (19 messages)
glow discharge (1 message)
Going from binned to unbinned data in the relion 2.0 folder structure (3 messages)
GPU memory requirements in Cluster (5 messages)
GPU Temperatures (was geforce vs tesla) (13 messages)
How to generate a new image stack after 2D-classification? (7 messages)
Image data compression for EMPIAR (14 messages)
Import error in MacOS 10.12 / cp command (3 messages)
Installation advice for a first-time user (1 message)
Institut Pasteur Course on Integrative Structural Biology 2017 (1 message)
International Workshop of Advanced Image Processing of Cryo-Electron Microscopy, Aug 6-10, Beijing (1 message)
Manual rotation of euler angles in Relion (5 messages)
MPI error (5 messages)
MTF for falcon 3 at 300 KV. (1 message)
PhD and Postdoc Position at University of Groningen (1 message)
PhD and postdoc positions at the Max Planck Institute, Tuebingen, Germany (1 message)
PhD student position at IGBMC, Strasbourg (1 message)
Plot Power v/s Resolution for CTF Results (1 message)
Post-doc and PhD positions in Bergen, Norway (1 message)
Post-doc in cryo-ET and sub-tomogram averaging at Oxford (1 message)
Postdoc available in Bristol (UK) in high resolution electron microscopy data processing (2 messages)
postdoctoral position in Oxford (1 message)
problem running relion_refine_mpi in relion2.0 (1 message)
Problem running star_replace_UVA.com script to replace per-particle defocus parameters after Gctf. (11 messages)
Question Regarding SEMC Lecture Compute Node (7 messages)
Questions regarding cluster node build for RELION2 (6 messages)
refine3d error (1 message)
RELION 2 - ignore single crashes in scheduled jobs? (1 message)
Relion 2D classification error (6 messages)
Relion Class3D running very slow (3 messages)
relion installation using apt-get (4 messages)
Relion2 - 2D classification convergence (3 messages)
Relion2 - ctf estimation error (3 messages)
Relion2 on gaming laptop? (1 message)
Relion2: Refine3D gets stuck at iteration 2 (14 messages)
Reminder: SPHIRE workshop in Dortmund (1 message)
Running Gctf on particle stacks? (3 messages)
Sovent flattening FSC error in helical refinement (5 messages)
SPHIRE workshop in Dortmund (1 message)
The Francis Crick Electron Microscopy Opening Symposium, London July 12th - 14th 2017 (1 message)
Vacancy: experienced researcher (1 message)
Vacancy: structural biologist with cryo-EM expertise at GSK closing date 24th March (1 message)
viewing autopicking results (6 messages)
Wiley prize to Frank, van Heel and Henderson (1 message)
Workshop on Free Energy Calculations from Molecular Simulation - May 31st 2017 (1 message)

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Subject Sorted by Subject, Chronologically

From

Date

Size

New Thread

'Ready-to-use' Relion-2/GPU workstations

'Ready-to-use' Relion-2/GPU workstations

Scott Cohen <[log in to unmask]>

Thu, 16 Mar 2017 23:29:13 +0000

581 lines

Re: 'Ready-to-use' Relion-2/GPU workstations

Wang, Zhao <[log in to unmask]>

Fri, 17 Mar 2017 01:04:28 +0000

642 lines

New Thread

3D reconstruction from negative stain data

3D reconstruction from negative stain data

Schulz, Eike-Christian <[log in to unmask]>

Wed, 8 Mar 2017 11:51:36 +0000

85 lines

Re: 3D reconstruction from negative stain data

Sjors Scheres <[log in to unmask]>

Wed, 8 Mar 2017 13:07:58 +0000

43 lines

Re: 3D reconstruction from negative stain data

Yoshikazu TANAKA <[log in to unmask]>

Wed, 8 Mar 2017 14:37:08 +0100

183 lines

Re: 3D reconstruction from negative stain data

Elad Binshtein <[log in to unmask]>

Wed, 8 Mar 2017 10:43:48 -0600

163 lines

New Thread

A few things I encountered using SSH from my mac

A few things I encountered using SSH from my mac

Yehuda Halfon <[log in to unmask]>

Sat, 4 Mar 2017 14:44:44 +0000

73 lines

Re: A few things I encountered using SSH from my mac

Juha Huiskonen <[log in to unmask]>

Sat, 4 Mar 2017 15:12:35 +0000

93 lines

Re: A few things I encountered using SSH from my mac

Erik Lindahl <[log in to unmask]>

Sat, 4 Mar 2017 16:52:36 +0100

105 lines

Re: A few things I encountered using SSH from my mac

Yehuda Halfon <[log in to unmask]>

Sat, 4 Mar 2017 15:54:19 +0000

117 lines

Re: A few things I encountered using SSH from my mac

Wolfgang Lugmayr <[log in to unmask]>

Mon, 6 Mar 2017 11:18:49 +0100

200 lines

Re: A few things I encountered using SSH from my mac

Yehuda Halfon <[log in to unmask]>

Mon, 6 Mar 2017 10:30:12 +0000

233 lines

New Thread

Academic and Research positions in the Leicester Institute of Structural and Chemical Biology

Academic and Research positions in the Leicester Institute of Structural and Chemical Biology

Louise Fairall <[log in to unmask]>

Fri, 10 Mar 2017 15:50:43 +0000

158 lines

New Thread

accelerate maximization GPU / CPU Relion-2

accelerate maximization GPU / CPU Relion-2

Dieter Blaas <[log in to unmask]>

Sun, 5 Mar 2017 10:50:52 +0100

37 lines

Re: accelerate maximization GPU / CPU Relion-2

bjoern <[log in to unmask]>

Sun, 5 Mar 2017 11:22:58 +0100

186 lines

New Thread

Adequate particle normalization prior to 2D classification?

Re: Adequate particle normalization prior to 2D classification?

Xiaodong Yan <[log in to unmask]>

Mon, 13 Mar 2017 02:05:45 +0000

25 lines

Re: Adequate particle normalization prior to 2D classification?

Craig Yoshioka <[log in to unmask]>

Mon, 13 Mar 2017 03:30:08 +0000

30 lines

Re: Adequate particle normalization prior to 2D classification?

Xiaodong Yan <[log in to unmask]>

Mon, 13 Mar 2017 05:25:05 +0000

19 lines

New Thread

Anisotropic mag correction in MotionCor2: input of distortion angle

Anisotropic mag correction in MotionCor2: input of distortion angle

Shawn Zheng <[log in to unmask]>

Thu, 16 Mar 2017 10:15:49 -0700

44 lines

New Thread

Box file converstion for helical segments coordinates to start-end coordinates

Box file converstion for helical segments coordinates to start-end coordinates

Kushal Sejwal <[log in to unmask]>

Wed, 29 Mar 2017 14:59:46 +0000

111 lines

New Thread

Buying old Open Compute

Buying old Open Compute

Markus Heckmann <[log in to unmask]>

Sat, 11 Mar 2017 08:39:32 +0100

20 lines

New Thread

CCP-EM Icknield Workshop for High Resolution Model Building - Reminder

CCP-EM Icknield Workshop for High Resolution Model Building - Reminder

Tom Burnley <[log in to unmask]>

Tue, 7 Mar 2017 09:33:51 +0000

133 lines

New Thread

Cloud and High Performance Computing in Biomedicine, UCL, London, 27 April 2017

Cloud and High Performance Computing in Biomedicine, UCL, London, 27 April 2017

Pragna Kiri <[log in to unmask]>

Thu, 2 Mar 2017 12:00:29 +0000

686 lines

Re: Cloud and High Performance Computing in Biomedicine, UCL, London, 27 April 2017

Pragna Kiri <[log in to unmask]>

Fri, 3 Mar 2017 10:23:56 +0000

906 lines

New Thread

combining data from two cameras

combining data from two cameras

Yehuda Halfon <[log in to unmask]>

Sun, 5 Mar 2017 10:51:24 +0000

50 lines

Re: combining data from two cameras

Kyle Morris <[log in to unmask]>

Mon, 6 Mar 2017 06:37:18 -0800

84 lines

New Thread

continuing old jobs in Relion/2.0

continuing old jobs in Relion/2.0

Zack Berndsen <[log in to unmask]>

Fri, 17 Mar 2017 19:22:09 +0000

133 lines

New Thread

Cryo-EM positions at EMBL

Cryo-EM positions at EMBL

Carsten Sachse <[log in to unmask]>

Fri, 24 Mar 2017 08:57:51 +0100

119 lines

New Thread

Cryo-EM symposium, Grenoble 6-7 July 2017

Cryo-EM symposium, Grenoble 6-7 July 2017

Wojtek Galej <[log in to unmask]>

Wed, 8 Mar 2017 10:02:43 +0100

53 lines

New Thread

CTF Final Resolution and CTF FOM using GCTF

CTF Final Resolution and CTF FOM using GCTF

Joshua Lobo <[log in to unmask]>

Fri, 31 Mar 2017 21:36:05 +0100

26 lines

Re: CTF Final Resolution and CTF FOM using GCTF

Kai Zhang <[log in to unmask]>

Fri, 31 Mar 2017 23:57:13 +0100

174 lines

New Thread

Deciding Patch Size for MotionCor2

Deciding Patch Size for MotionCor2

Joshua Lobo <[log in to unmask]>

Thu, 23 Mar 2017 03:12:25 +0000

22 lines

Re: Deciding Patch Size for MotionCor2

Craig Yoshioka <[log in to unmask]>

Thu, 23 Mar 2017 03:22:34 +0000

25 lines

Re: Deciding Patch Size for MotionCor2

Joshua Lobo <[log in to unmask]>

Thu, 23 Mar 2017 15:54:39 -0500

112 lines

New Thread

eBIC and CCP-EM Spring Symposia 24-26th April 2017 - Reminder

eBIC and CCP-EM Spring Symposia 24-26th April 2017 - Reminder

Tom Burnley <[log in to unmask]>

Fri, 3 Mar 2017 14:32:04 +0000

180 lines

New Thread

ERROR: CudaCustomAllocator out of memory

ERROR: CudaCustomAllocator out of memory

X.Y. Pei <[log in to unmask]>

Sun, 12 Mar 2017 09:18:46 +0000

39 lines

Re: ERROR: CudaCustomAllocator out of memory

Erik Lindahl <[log in to unmask]>

Sun, 12 Mar 2017 10:26:46 +0100

119 lines

Re: ERROR: CudaCustomAllocator out of memory

X.Y. Pei <[log in to unmask]>

Mon, 13 Mar 2017 10:19:44 +0000

53 lines

Re: ERROR: CudaCustomAllocator out of memory

Erik Lindahl <[log in to unmask]>

Mon, 13 Mar 2017 11:43:20 +0100

154 lines

New Thread

Founders edition vs overclocked GeForce cards

Founders edition vs overclocked GeForce cards

Michael Landsberg <[log in to unmask]>

Tue, 7 Mar 2017 05:57:39 +0000

62 lines

Re: Founders edition vs overclocked GeForce cards

Adrian Koh Fujiet <[log in to unmask]>

Tue, 7 Mar 2017 16:42:02 +0900

166 lines

New Thread

Gctf usage with relion2

Gctf usage with relion2

Julian Reitz <[log in to unmask]>

Wed, 8 Mar 2017 16:23:49 +0000

31 lines

New Thread

geforce vs tesla

geforce vs tesla

Benoît Zuber <[log in to unmask]>

Mon, 6 Mar 2017 05:58:07 +0000

73 lines

Re: geforce vs tesla

Erik Lindahl <[log in to unmask]>

Mon, 6 Mar 2017 08:00:51 +0100

155 lines

Re: geforce vs tesla

Benoît Zuber <[log in to unmask]>

Mon, 6 Mar 2017 11:00:06 +0000

159 lines

Re: geforce vs tesla

Dominik A. Herbst <[log in to unmask]>

Mon, 6 Mar 2017 17:12:11 +0100

630 lines

Re: geforce vs tesla

Bharat Reddy <[log in to unmask]>

Mon, 6 Mar 2017 11:51:12 -0600

196 lines

Re: geforce vs tesla

Craig Yoshioka <[log in to unmask]>

Mon, 6 Mar 2017 18:00:32 +0000

154 lines

Re: geforce vs tesla

Ross Walker <[log in to unmask]>

Mon, 6 Mar 2017 11:06:27 -0700

415 lines

Re: geforce vs tesla

Hoover , David (NIH/CIT) [E] <[log in to unmask]>

Mon, 6 Mar 2017 13:07:29 -0500

59 lines

Re: geforce vs tesla

Craig Yoshioka <[log in to unmask]>

Mon, 6 Mar 2017 18:13:18 +0000

87 lines

Re: geforce vs tesla

Bharat Reddy <[log in to unmask]>

Mon, 6 Mar 2017 13:09:11 -0600

278 lines

Re: geforce vs tesla

Dominik A. Herbst <[log in to unmask]>

Mon, 6 Mar 2017 22:12:39 +0100

734 lines

Re: geforce vs tesla

Ross Walker <[log in to unmask]>

Mon, 6 Mar 2017 14:13:12 -0700

293 lines

Re: geforce vs tesla

Bharat Reddy <[log in to unmask]>

Mon, 6 Mar 2017 16:21:34 -0600

407 lines

Re: geforce vs tesla

Ross Walker <[log in to unmask]>

Mon, 6 Mar 2017 16:00:05 -0700

447 lines

Re: geforce vs tesla

Joshua Lobo <[log in to unmask]>

Mon, 6 Mar 2017 17:13:57 -0600

977 lines

Re: geforce vs tesla

Bharat Reddy <[log in to unmask]>

Mon, 6 Mar 2017 17:38:27 -0600

560 lines

Re: geforce vs tesla

Ross Walker <[log in to unmask]>

Mon, 6 Mar 2017 17:03:41 -0700

616 lines

Re: geforce vs tesla

Dr. Clara Cai <[log in to unmask]>

Mon, 6 Mar 2017 17:03:55 -0800

1017 lines

Re: geforce vs tesla

Benoît Zuber <[log in to unmask]>

Tue, 7 Mar 2017 06:15:25 +0000

825 lines

New Thread

glow discharge

glow discharge

Tian. Li <[log in to unmask]>

Wed, 15 Mar 2017 14:50:02 +0000

32 lines

New Thread

Going from binned to unbinned data in the relion 2.0 folder structure

Going from binned to unbinned data in the relion 2.0 folder structure

Ali Khan <[log in to unmask]>

Mon, 6 Mar 2017 19:07:59 +0000

24 lines

Re: Going from binned to unbinned data in the relion 2.0 folder structure

Ali Khan <[log in to unmask]>

Mon, 6 Mar 2017 15:39:36 -0500

134 lines

Re: Going from binned to unbinned data in the relion 2.0 folder structure

Xiaodi Yu <[log in to unmask]>

Mon, 6 Mar 2017 20:38:12 +0000

151 lines

New Thread

GPU memory requirements in Cluster

GPU memory requirements in Cluster

Joshua Lobo <[log in to unmask]>

Wed, 15 Mar 2017 00:53:43 +0000

22 lines

Re: GPU memory requirements in Cluster

Lu Gan <[log in to unmask]>

Wed, 15 Mar 2017 09:09:38 +0800

114 lines

Re: GPU memory requirements in Cluster

Erik Lindahl <[log in to unmask]>

Wed, 15 Mar 2017 08:18:44 +0100

176 lines

Re: GPU memory requirements in Cluster

Dr. Clara Cai <[log in to unmask]>

Wed, 15 Mar 2017 12:22:59 -0700

207 lines

Re: GPU memory requirements in Cluster

Joshua Lobo <[log in to unmask]>

Thu, 16 Mar 2017 08:03:02 -0500

198 lines

New Thread

GPU Temperatures (was geforce vs tesla)

Re: GPU Temperatures (was geforce vs tesla)

Chris Richardson <[log in to unmask]>

Tue, 7 Mar 2017 10:33:22 +0000

121 lines

Re: GPU Temperatures (was geforce vs tesla)

Huy Bui <[log in to unmask]>

Tue, 7 Mar 2017 22:47:13 -0500

250 lines

Re: GPU Temperatures (was geforce vs tesla)

Huy Bui <[log in to unmask]>

Wed, 8 Mar 2017 00:20:22 -0500

793 lines

Re: GPU Temperatures (was geforce vs tesla)

Bart <[log in to unmask]>

Wed, 8 Mar 2017 13:37:14 +0100

34 lines

Re: GPU Temperatures (was geforce vs tesla)

Huy Bui <[log in to unmask]>

Wed, 8 Mar 2017 09:20:46 -0500

439 lines

Re: GPU Temperatures (was geforce vs tesla)

j s <[log in to unmask]>

Wed, 8 Mar 2017 23:43:32 +0800

269 lines

Re: GPU Temperatures (was geforce vs tesla)

Dominik A. Herbst <[log in to unmask]>

Wed, 8 Mar 2017 17:40:41 +0100

467 lines

Re: GPU Temperatures (was geforce vs tesla)

Craig Yoshioka <[log in to unmask]>

Wed, 8 Mar 2017 17:19:08 +0000

282 lines

Re: GPU Temperatures (was geforce vs tesla)

Reza Khayat <[log in to unmask]>

Wed, 8 Mar 2017 20:31:17 +0000

464 lines

Re: GPU Temperatures (was geforce vs tesla)

Joshua Lobo <[log in to unmask]>

Wed, 8 Mar 2017 14:51:59 -0600

521 lines

Re: GPU Temperatures (was geforce vs tesla)

Huy Bui <[log in to unmask]>

Wed, 8 Mar 2017 16:03:15 -0500

568 lines

Re: GPU Temperatures (was geforce vs tesla)

Huy Bui <[log in to unmask]>

Wed, 8 Mar 2017 16:32:25 -0500

596 lines

Re: GPU Temperatures (was geforce vs tesla)

Erik Lindahl <[log in to unmask]>

Wed, 8 Mar 2017 22:46:23 +0100

625 lines

New Thread

How to generate a new image stack after 2D-classification?

How to generate a new image stack after 2D-classification?

Fengbin Wang <[log in to unmask]>

Mon, 27 Mar 2017 20:38:35 +0100

26 lines

Re: How to generate a new image stack after 2D-classification?

Sjors Scheres <[log in to unmask]>

Tue, 28 Mar 2017 09:45:01 +0100

35 lines

Re: How to generate a new image stack after 2D-classification?

Fengbin Wang <[log in to unmask]>

Wed, 29 Mar 2017 15:52:07 +0100

24 lines

Re: How to generate a new image stack after 2D-classification?

Aaron Lewis <[log in to unmask]>

Wed, 29 Mar 2017 15:33:10 +0000

65 lines

Re: How to generate a new image stack after 2D-classification?

Sjors Scheres <[log in to unmask]>

Wed, 29 Mar 2017 17:33:31 +0100

34 lines

Re: How to generate a new image stack after 2D-classification?

Fengbin Wang <[log in to unmask]>

Wed, 29 Mar 2017 18:49:46 +0100

24 lines

Re: How to generate a new image stack after 2D-classification?

Sjors Scheres <[log in to unmask]>

Thu, 30 Mar 2017 08:20:09 +0100

43 lines

New Thread

Image data compression for EMPIAR

Image data compression for EMPIAR

Ardan Patwardhan <[log in to unmask]>

Wed, 15 Mar 2017 10:28:11 +0000

364 lines

Re: Image data compression for EMPIAR

Takanori Nakane <[log in to unmask]>

Wed, 15 Mar 2017 21:07:48 +0900

102 lines

Re: Image data compression for EMPIAR

Ludtke, Steven J <[log in to unmask]>

Wed, 15 Mar 2017 15:11:45 +0000

303 lines

Re: Image data compression for EMPIAR

Alexis Rohou <[log in to unmask]>

Wed, 15 Mar 2017 08:34:39 -0700

119 lines

Re: Image data compression for EMPIAR

Wolfgang Lugmayr <[log in to unmask]>

Wed, 15 Mar 2017 16:51:03 +0100

112 lines

Re: Image data compression for EMPIAR

Jose Miguel de la Rosa Trevin <[log in to unmask]>

Wed, 15 Mar 2017 18:16:25 +0100

274 lines

Re: Image data compression for EMPIAR

Robert McLeod <[log in to unmask]>

Wed, 15 Mar 2017 18:21:23 +0000

115 lines

Re: Image data compression for EMPIAR

Craig Yoshioka <[log in to unmask]>

Wed, 15 Mar 2017 19:45:37 +0000

242 lines

Re: Image data compression for EMPIAR

Takanori Nakane <[log in to unmask]>

Thu, 16 Mar 2017 10:50:03 +0900

133 lines

Re: Image data compression for EMPIAR

Ludtke, Steven J <[log in to unmask]>

Thu, 16 Mar 2017 13:50:52 +0000

515 lines

Re: Image data compression for EMPIAR

Colin Palmer <[log in to unmask]>

Fri, 17 Mar 2017 19:34:17 +0000

254 lines

Re: Image data compression for EMPIAR

Robert McLeod <[log in to unmask]>

Sat, 18 Mar 2017 00:02:32 +0000

544 lines

Re: Image data compression for EMPIAR

Ludtke, Steven J <[log in to unmask]>

Sat, 18 Mar 2017 01:09:28 +0000

887 lines

Re: Image data compression for EMPIAR

Dimitry Tegunov <[log in to unmask]>

Sun, 19 Mar 2017 18:46:24 +0000

48 lines

New Thread

Import error in MacOS 10.12 / cp command

Import error in MacOS 10.12 / cp command

Kushal Sejwal <[log in to unmask]>

Tue, 21 Mar 2017 10:56:54 +0000

67 lines

Re: Import error in MacOS 10.12 / cp command

Kushal Sejwal <[log in to unmask]>

Tue, 21 Mar 2017 13:04:47 +0000

214 lines

Re: Import error in MacOS 10.12 / cp command

Alexander Shkumatov <[log in to unmask]>

Wed, 22 Mar 2017 15:31:25 +0100

263 lines

New Thread

Installation advice for a first-time user

Installation advice for a first-time user

James S. <[log in to unmask]>

Thu, 23 Mar 2017 13:25:52 +0000

329 lines

New Thread

Institut Pasteur Course on Integrative Structural Biology 2017

Institut Pasteur Course on Integrative Structural Biology 2017

Claudine MAYER <[log in to unmask]>

Sun, 19 Mar 2017 11:11:14 +0100

821 lines

New Thread

International Workshop of Advanced Image Processing of Cryo-Electron Microscopy, Aug 6-10, Beijing

International Workshop of Advanced Image Processing of Cryo-Electron Microscopy, Aug 6-10, Beijing

Fei Sun <[log in to unmask]>

Wed, 29 Mar 2017 14:20:30 +0800

18495 lines

New Thread

Manual rotation of euler angles in Relion

Manual rotation of euler angles in Relion

Ruda Santos <[log in to unmask]>

Thu, 23 Mar 2017 21:38:37 +0000

7568 lines

Re: Manual rotation of euler angles in Relion

Daniel Larsson <[log in to unmask]>

Fri, 24 Mar 2017 16:36:45 +0000

86 lines

Re: Manual rotation of euler angles in Relion

Bjoern Forsberg <[log in to unmask]>

Sun, 26 Mar 2017 10:42:10 +0200

226 lines

Re: Manual rotation of euler angles in Relion

Ruda Santos <[log in to unmask]>

Mon, 27 Mar 2017 08:44:36 -0400

271 lines

Re: Manual rotation of euler angles in Relion

Serban Ilca <[log in to unmask]>

Mon, 27 Mar 2017 14:53:11 +0100

95 lines

New Thread

MPI error

MPI error

Ernesto Arias <[log in to unmask]>

Fri, 17 Mar 2017 20:24:37 -0400

255 lines

Re: MPI error

Chris Richardson <[log in to unmask]>

Thu, 30 Mar 2017 11:49:02 +0000

262 lines

Re: MPI error

Bjoern Forsberg <[log in to unmask]>

Thu, 30 Mar 2017 14:07:30 +0200

473 lines

Re: MPI error

Chris Richardson <[log in to unmask]>

Thu, 30 Mar 2017 12:26:44 +0000

324 lines

Re: MPI error

Bjoern Forsberg <[log in to unmask]>

Thu, 30 Mar 2017 16:38:02 +0200

591 lines

New Thread

MTF for falcon 3 at 300 KV.

MTF for falcon 3 at 300 KV.

Puneet juneja <[log in to unmask]>

Fri, 10 Mar 2017 12:13:15 +0100

44 lines

New Thread

PhD and Postdoc Position at University of Groningen

PhD and Postdoc Position at University of Groningen

Cristina Paulino <[log in to unmask]>

Thu, 16 Mar 2017 13:42:37 +0100

243 lines

New Thread

PhD and postdoc positions at the Max Planck Institute, Tuebingen, Germany

PhD and postdoc positions at the Max Planck Institute, Tuebingen, Germany

Eugene Valkov <[log in to unmask]>

Wed, 29 Mar 2017 19:14:57 +0200

3184 lines

New Thread

PhD student position at IGBMC, Strasbourg

PhD student position at IGBMC, Strasbourg

Helgo Schmidt <[log in to unmask]>

Fri, 24 Mar 2017 10:34:29 +0000

266 lines

New Thread

Plot Power v/s Resolution for CTF Results

Plot Power v/s Resolution for CTF Results

Joshua Lobo <[log in to unmask]>

Mon, 20 Mar 2017 21:14:22 +0000

19 lines

New Thread

Post-doc and PhD positions in Bergen, Norway

Post-doc and PhD positions in Bergen, Norway

Inari Kursula <[log in to unmask]>

Mon, 13 Mar 2017 17:11:02 +0100

193 lines

New Thread

Post-doc in cryo-ET and sub-tomogram averaging at Oxford

Post-doc in cryo-ET and sub-tomogram averaging at Oxford

Tanmay Bharat <[log in to unmask]>

Wed, 15 Mar 2017 13:12:38 +0000

39 lines

New Thread

Postdoc available in Bristol (UK) in high resolution electron microscopy data processing

Postdoc available in Bristol (UK) in high resolution electron microscopy data processing

Ariel Blocker <[log in to unmask]>

Thu, 9 Mar 2017 11:59:18 +0000

1454 lines

Postdoc available in Bristol (UK) in high resolution electron microscopy data processing

Ariel Blocker <[log in to unmask]>

Mon, 20 Mar 2017 20:19:19 +0000

1457 lines

New Thread

postdoctoral position in Oxford

postdoctoral position in Oxford

Lidia Vasilieva <[log in to unmask]>

Thu, 23 Mar 2017 09:38:33 +0000

38 lines

New Thread

problem running relion_refine_mpi in relion2.0

problem running relion_refine_mpi in relion2.0

Wei Zhang <[log in to unmask]>

Fri, 3 Mar 2017 14:14:22 -0600

64 lines

New Thread

Problem running star_replace_UVA.com script to replace per-particle defocus parameters after Gctf.

Problem running star_replace_UVA.com script to replace per-particle defocus parameters after Gctf.

Oliver Clarke <[log in to unmask]>

Thu, 2 Mar 2017 10:37:16 -0500

27 lines

Re: Problem running star_replace_UVA.com script to replace per-particle defocus parameters after Gctf.

Oliver Clarke <[log in to unmask]>

Thu, 2 Mar 2017 17:02:26 -0500

49 lines

Re: Problem running star_replace_UVA.com script to replace per-particle defocus parameters after Gctf.

Oliver Clarke <[log in to unmask]>

Thu, 2 Mar 2017 17:21:06 -0500

109 lines

Re: Problem running star_replace_UVA.com script to replace per-particle defocus parameters after Gctf.

Oliver Clarke <[log in to unmask]>

Thu, 2 Mar 2017 17:32:37 -0500

120 lines

Re: Problem running star_replace_UVA.com script to replace per-particle defocus parameters after Gctf.

Oliver Clarke <[log in to unmask]>

Thu, 2 Mar 2017 18:51:17 -0500

154 lines

Re: Problem running star_replace_UVA.com script to replace per-particle defocus parameters after Gctf.

Kai Zhang <[log in to unmask]>

Fri, 3 Mar 2017 20:15:19 +0800

418 lines

Re: Problem running star_replace_UVA.com script to replace per-particle defocus parameters after Gctf.

Oliver Clarke <[log in to unmask]>

Fri, 3 Mar 2017 08:33:31 -0500

513 lines

Re: Problem running star_replace_UVA.com script to replace per-particle defocus parameters after Gctf.

Reza Khayat <[log in to unmask]>

Fri, 3 Mar 2017 14:13:08 +0000

1052 lines

Re: Problem running star_replace_UVA.com script to replace per-particle defocus parameters after Gctf.

Kai Zhang <[log in to unmask]>

Fri, 3 Mar 2017 14:17:22 +0000

876 lines

Re: Problem running star_replace_UVA.com script to replace per-particle defocus parameters after Gctf.

Oliver Clarke <[log in to unmask]>

Fri, 3 Mar 2017 09:21:44 -0500

1145 lines

Re: Problem running star_replace_UVA.com script to replace per-particle defocus parameters after Gctf.

Bharat Reddy <[log in to unmask]>

Fri, 3 Mar 2017 08:43:04 -0600

159 lines

New Thread

Question Regarding SEMC Lecture Compute Node

Question Regarding SEMC Lecture Compute Node

Joshua Lobo <[log in to unmask]>

Mon, 6 Mar 2017 18:09:14 +0000

24 lines

Re: Question Regarding SEMC Lecture Compute Node

Yong Zi Tan <[log in to unmask]>

Tue, 7 Mar 2017 21:17:13 +0000

99 lines

Re: Question Regarding SEMC Lecture Compute Node

Yong Zi Tan <[log in to unmask]>

Tue, 7 Mar 2017 21:26:12 +0000

132 lines

Re: Question Regarding SEMC Lecture Compute Node

Joshua Lobo <[log in to unmask]>

Tue, 7 Mar 2017 20:17:55 -0500

212 lines

Re: Question Regarding SEMC Lecture Compute Node

Alex Noble <[log in to unmask]>

Wed, 8 Mar 2017 19:27:21 +0000

27 lines

Re: Question Regarding SEMC Lecture Compute Node

Oliver Clarke <[log in to unmask]>

Wed, 8 Mar 2017 14:43:13 -0500

41 lines

Re: Question Regarding SEMC Lecture Compute Node

Dr. Clara Cai <[log in to unmask]>

Wed, 8 Mar 2017 22:49:18 -0800

139 lines

New Thread

Questions regarding cluster node build for RELION2

Questions regarding cluster node build for RELION2

Joshua Lobo <[log in to unmask]>

Thu, 2 Mar 2017 19:34:25 +0000

25 lines

Re: Questions regarding cluster node build for RELION2

Erik Lindahl <[log in to unmask]>

Thu, 2 Mar 2017 20:55:18 +0100

114 lines

Re: Questions regarding cluster node build for RELION2

Joshua Lobo <[log in to unmask]>

Thu, 2 Mar 2017 14:48:31 -0600

165 lines

Re: Questions regarding cluster node build for RELION2

Erik Lindahl <[log in to unmask]>

Thu, 2 Mar 2017 22:19:16 +0100

98 lines

Re: Questions regarding cluster node build for RELION2

Ross Walker <[log in to unmask]>

Thu, 2 Mar 2017 16:24:21 -0500

168 lines

Re: Questions regarding cluster node build for RELION2

Joshua Lobo <[log in to unmask]>

Fri, 3 Mar 2017 09:07:25 -0600

32 lines

New Thread

refine3d error

refine3d error

Kong, Leopold (NIH/NIDDK) [F] <[log in to unmask]>

Tue, 28 Mar 2017 21:32:45 +0000

39 lines

New Thread

RELION 2 - ignore single crashes in scheduled jobs?

RELION 2 - ignore single crashes in scheduled jobs?

Lu Gan <[log in to unmask]>

Tue, 14 Mar 2017 09:19:24 +0000

23 lines

New Thread

Relion 2D classification error

Relion 2D classification error

Yu, Zhiheng <[log in to unmask]>

Thu, 16 Mar 2017 22:07:05 +0000

84 lines

Re: Relion 2D classification error

Dari Kimanius <[log in to unmask]>

Fri, 17 Mar 2017 03:39:23 +0100

200 lines

Re: Relion 2D classification error

Lu Gan <[log in to unmask]>

Fri, 17 Mar 2017 11:12:34 +0800

257 lines

Re: Relion 2D classification error

Xiaodi Yu <[log in to unmask]>

Fri, 17 Mar 2017 17:35:30 +0000

216 lines

Re: Relion 2D classification error

Yu, Zhiheng <[log in to unmask]>

Fri, 17 Mar 2017 22:24:16 +0000

139 lines

Re: Relion 2D classification error

Dari Kimanius <[log in to unmask]>

Sat, 18 Mar 2017 03:47:52 +0100

327 lines

New Thread

Relion Class3D running very slow

Relion Class3D running very slow

Alok Sharma <[log in to unmask]>

Wed, 15 Mar 2017 12:43:19 -0400

50 lines

Re: Relion Class3D running very slow

Wolfgang Lugmayr <[log in to unmask]>

Wed, 15 Mar 2017 17:48:12 +0100

48 lines

Re: Relion Class3D running very slow

Sjors Scheres <[log in to unmask]>

Thu, 16 Mar 2017 09:35:15 +0000

63 lines

New Thread

relion installation using apt-get

relion installation using apt-get

Peter Kirchweger <[log in to unmask]>

Thu, 16 Mar 2017 13:21:04 +0100

103 lines

Re: relion installation using apt-get

Erik Lindahl <[log in to unmask]>

Thu, 16 Mar 2017 13:43:17 +0100

137 lines

Re: relion installation using apt-get

Peter Kirchweger <[log in to unmask]>

Thu, 16 Mar 2017 14:06:54 +0100

322 lines

Re: relion installation using apt-get

Erik Lindahl <[log in to unmask]>

Thu, 16 Mar 2017 15:12:49 +0100

300 lines

New Thread

Relion2 - 2D classification convergence

Relion2 - 2D classification convergence

Schulz, Eike-Christian <[log in to unmask]>

Tue, 28 Mar 2017 13:50:16 +0000

137 lines

Re: Relion2 - 2D classification convergence

Sjors Scheres <[log in to unmask]>

Tue, 28 Mar 2017 15:12:44 +0100

52 lines

Re: Relion2 - 2D classification convergence

Fislage, Marcus <[log in to unmask]>

Tue, 28 Mar 2017 14:16:13 +0000

93 lines

New Thread

Relion2 - ctf estimation error

Relion2 - ctf estimation error

Yingyi Zhang <[log in to unmask]>

Tue, 28 Mar 2017 16:30:12 +0200

52 lines

Re: Relion2 - ctf estimation error

Sjors Scheres <[log in to unmask]>

Tue, 28 Mar 2017 16:22:53 +0100

75 lines

Re: Relion2 - ctf estimation error

Yingyi Zhang <[log in to unmask]>

Tue, 28 Mar 2017 17:38:45 +0200

91 lines

New Thread

Relion2 on gaming laptop?

Re: Relion2 on gaming laptop?

Joshua Lobo <[log in to unmask]>

Sun, 5 Mar 2017 21:19:28 -0600

180 lines

New Thread

Relion2: Refine3D gets stuck at iteration 2

Relion2: Refine3D gets stuck at iteration 2

Dieter Blaas <[log in to unmask]>

Wed, 15 Mar 2017 13:51:06 +0100

87 lines

Re: Relion2: Refine3D gets stuck at iteration 2

Bjoern Forsberg <[log in to unmask]>

Wed, 15 Mar 2017 15:54:52 +0100

327 lines

Re: Relion2: Refine3D gets stuck at iteration 2

Tru Huynh <[log in to unmask]>

Wed, 15 Mar 2017 17:22:27 +0100

38 lines

Re: Relion2: Refine3D gets stuck at iteration 2

Bjoern Forsberg <[log in to unmask]>

Wed, 15 Mar 2017 17:44:42 +0100

42 lines

Re: Relion2: Refine3D gets stuck at iteration 2

Huy Bui <[log in to unmask]>

Wed, 15 Mar 2017 15:47:24 -0400

110 lines

Re: Relion2: Refine3D gets stuck at iteration 2

Bjoern Forsberg <[log in to unmask]>

Wed, 15 Mar 2017 22:09:13 +0100

202 lines

Re: Relion2: Refine3D gets stuck at iteration 2

Tru Huynh <[log in to unmask]>

Thu, 16 Mar 2017 10:36:43 +0100

154 lines

Re: Relion2: Refine3D gets stuck at iteration 2

Tru Huynh <[log in to unmask]>

Thu, 16 Mar 2017 10:40:26 +0100

710 lines

Re: Relion2: Refine3D gets stuck at iteration 2

Sjors Scheres <[log in to unmask]>

Thu, 16 Mar 2017 09:40:47 +0000

168 lines

Re: Relion2: Refine3D gets stuck at iteration 2

Tru Huynh <[log in to unmask]>

Thu, 16 Mar 2017 11:08:58 +0100

1936 lines

Re: Relion2: Refine3D gets stuck at iteration 2

Bjoern Forsberg <[log in to unmask]>

Fri, 17 Mar 2017 03:19:04 +0100

256 lines

Re: Relion2: Refine3D gets stuck at iteration 2

Tru Huynh <[log in to unmask]>

Fri, 17 Mar 2017 09:20:50 +0100

98 lines

Re: Relion2: Refine3D gets stuck at iteration 2

Tru Huynh <[log in to unmask]>

Thu, 23 Mar 2017 20:45:03 +0100

35 lines

Re: Relion2: Refine3D gets stuck at iteration 2

Tru Huynh <[log in to unmask]>

Thu, 23 Mar 2017 20:58:55 +0100

48 lines

New Thread

Reminder: SPHIRE workshop in Dortmund

Reminder: SPHIRE workshop in Dortmund

Stefan Raunser <[log in to unmask]>

Mon, 27 Mar 2017 06:11:16 +0000

131 lines

New Thread

Running Gctf on particle stacks?

Running Gctf on particle stacks?

Oliver Clarke <[log in to unmask]>

Fri, 3 Mar 2017 10:03:46 -0500

32 lines

Re: Running Gctf on particle stacks?

Kai Zhang <[log in to unmask]>

Fri, 3 Mar 2017 15:19:50 +0000

126 lines

Re: Running Gctf on particle stacks?

Oliver Clarke <[log in to unmask]>

Fri, 3 Mar 2017 10:37:37 -0500

202 lines

New Thread

Sovent flattening FSC error in helical refinement

Sovent flattening FSC error in helical refinement

Kotaro Tanaka <[log in to unmask]>

Wed, 1 Mar 2017 02:23:34 +0000

51 lines

Re: Sovent flattening FSC error in helical refinement

Kotaro Tanaka <[log in to unmask]>

Wed, 1 Mar 2017 04:17:11 +0000

25 lines

Re: Sovent flattening FSC error in helical refinement

Jiang,Qiu-Xing <[log in to unmask]>

Wed, 1 Mar 2017 11:16:36 +0000

55 lines

Re: Sovent flattening FSC error in helical refinement

Sjors Scheres <[log in to unmask]>

Wed, 1 Mar 2017 16:09:43 +0000

46 lines

Re: Sovent flattening FSC error in helical refinement

Kotaro Tanaka <[log in to unmask]>

Thu, 2 Mar 2017 10:21:41 +0900

72 lines

New Thread

SPHIRE workshop in Dortmund

SPHIRE workshop in Dortmund

Stefan Raunser <[log in to unmask]>

Thu, 9 Mar 2017 08:46:37 +0000

4633 lines

New Thread

The Francis Crick Electron Microscopy Opening Symposium, London July 12th - 14th 2017

The Francis Crick Electron Microscopy Opening Symposium, London July 12th - 14th 2017

Raffaella Carzaniga <[log in to unmask]>

Wed, 29 Mar 2017 22:22:16 +0100

34 lines

New Thread

Vacancy: experienced researcher

Vacancy: experienced researcher

Geraets, James A <[log in to unmask]>

Mon, 20 Mar 2017 16:45:13 +0000

81 lines

New Thread

Vacancy: structural biologist with cryo-EM expertise at GSK closing date 24th March

Vacancy: structural biologist with cryo-EM expertise at GSK closing date 24th March

Chun-wa Chung <[log in to unmask]>

Mon, 6 Mar 2017 09:58:39 +0000

345 lines

New Thread

viewing autopicking results

viewing autopicking results

Kong, Leopold (NIH/NIDDK) [F] <[log in to unmask]>

Thu, 2 Mar 2017 16:05:52 +0000

71 lines

Re: viewing autopicking results

Kong, Leopold (NIH/NIDDK) [F] <[log in to unmask]>

Thu, 2 Mar 2017 18:39:21 +0000

109 lines

Re: viewing autopicking results

Kong, Leopold (NIH/NIDDK) [F] <[log in to unmask]>

Fri, 3 Mar 2017 13:52:17 +0000

77 lines

Re: viewing autopicking results

Sjors Scheres <[log in to unmask]>

Fri, 3 Mar 2017 13:57:59 +0000

80 lines

Re: viewing autopicking results

Kong, Leopold (NIH/NIDDK) [F] <[log in to unmask]>

Fri, 3 Mar 2017 14:46:45 +0000

101 lines

Re: viewing autopicking results

Sjors Scheres <[log in to unmask]>

Fri, 3 Mar 2017 14:56:42 +0000

109 lines

New Thread

Wiley prize to Frank, van Heel and Henderson

Wiley prize to Frank, van Heel and Henderson

Ardan Patwardhan <[log in to unmask]>

Thu, 2 Mar 2017 11:44:27 +0000

22 lines

New Thread

Workshop on Free Energy Calculations from Molecular Simulation - May 31st 2017

Workshop on Free Energy Calculations from Molecular Simulation - May 31st 2017

Pragna Kiri <[log in to unmask]>

Thu, 16 Mar 2017 11:30:59 +0000

1312 lines

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