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January 2016


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Table of Contents:

Adequate particle normalization prior to 2D classification? (6 messages)
Astbury Conversation Meeting (1 message)
CCP-EM Icknield Workshop on Model Building and Refinement for High Resolution EM Maps (2 messages)
cluster crash in last iteration (4 messages)
Computational requirements for direct electron detector (2 messages)
continue 3D refinement with greater offset range (2 messages)
Deadline extended: Fully funded fellowships to participate in Structural Biology event in South America (1 message)
Display the SFC curve from the xml file generated from post-processing (7 messages)
Editing an MRC stack (3 messages)
Faculty position in the Department of Biophysics, NIMHANS, Bangalore, India (1 message)
FW: Software Outlook programme survey (1 message)
mask and loss of resolution (6 messages)
postdoc opportunity at Imperial College London (1 message)
Postdoc position at Imperial college, London (1 message)
Postdoc position in cryoEM at Warwick University, UK - closing date 4th Feb (1 message)
Postdoctoral position in high-resolution cryo-EM at FSU (1 message)
Project manager in TEM (1 message)
relion - relion terminate called after throwing an instance of 'RelionError' (2 messages)
RELION to FREALIGN parameter conversion script (4 messages)
relion_preprocess greps ctf values from log files only? (4 messages)
resolution for individual protein within a complex and relion (12 messages)
single precision compile for Relion 1.4 (2 messages)
single precision Relion compile (2 messages)
slow last iteration in autorefine (12 messages)
The Astbury Conversation - Reminder (1 message)
unfiltered map from 3D classification (4 messages)
Vectorized RELION (14 messages)
wwPDB Deposition & Annotation System Now Available for 3DEM Structures (1 message)
[3dem] [ccpem] Adequate particle normalization prior to 2D classification? (5 messages)

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New Thread

Adequate particle normalization prior to 2D classification?

Adequate particle normalization prior to 2D classification?

Nancy Meyer <[log in to unmask]>

Wed, 27 Jan 2016 00:22:18 +0000

143 lines

Re: Adequate particle normalization prior to 2D classification?

Sjors Scheres <[log in to unmask]>

Wed, 27 Jan 2016 08:05:35 -0000

63 lines

Re: Adequate particle normalization prior to 2D classification?

Nancy Meyer <[log in to unmask]>

Wed, 27 Jan 2016 20:31:58 +0000

53684 lines

Re: Adequate particle normalization prior to 2D classification?

Sjors Scheres <[log in to unmask]>

Wed, 27 Jan 2016 21:10:29 -0000

145 lines

Re: Adequate particle normalization prior to 2D classification?

Nancy Meyer <[log in to unmask]>

Wed, 27 Jan 2016 23:48:13 +0000

193 lines

Re: Adequate particle normalization prior to 2D classification?

Marin van Heel <[log in to unmask]>

Sat, 30 Jan 2016 14:07:58 +0100

355 lines

New Thread

Astbury Conversation Meeting

Astbury Conversation Meeting

Tom Burnley <[log in to unmask]>

Wed, 13 Jan 2016 11:29:51 +0000

135 lines

New Thread

CCP-EM Icknield Workshop on Model Building and Refinement for High Resolution EM Maps

CCP-EM Icknield Workshop on Model Building and Refinement for High Resolution EM Maps

Tom Burnley <[log in to unmask]>

Thu, 21 Jan 2016 20:03:22 +0000

123 lines

CCP-EM Icknield Workshop on Model Building and Refinement for High Resolution EM Maps

Tom Burnley <[log in to unmask]>

Tue, 26 Jan 2016 10:10:58 +0000

135 lines

New Thread

cluster crash in last iteration

cluster crash in last iteration

Yan Zhang <[log in to unmask]>

Wed, 20 Jan 2016 11:41:00 -0500

138 lines

Re: cluster crash in last iteration

Sjors Scheres <[log in to unmask]>

Wed, 20 Jan 2016 20:49:56 -0000

84 lines

Re: cluster crash in last iteration

Wang, Joe <[log in to unmask]>

Wed, 20 Jan 2016 21:43:35 +0000

106 lines

Re: cluster crash in last iteration

Sjors Scheres <[log in to unmask]>

Thu, 21 Jan 2016 07:54:38 -0000

117 lines

New Thread

Computational requirements for direct electron detector

Computational requirements for direct electron detector

Tobias Starborg <[log in to unmask]>

Fri, 8 Jan 2016 18:57:48 +0000

93 lines

Re: Computational requirements for direct electron detector

Sjors Scheres <[log in to unmask]>

Sat, 9 Jan 2016 10:09:06 -0000

67 lines

New Thread

continue 3D refinement with greater offset range

continue 3D refinement with greater offset range

Yan Zhang <[log in to unmask]>

Fri, 8 Jan 2016 14:46:52 -0500

37 lines

Re: continue 3D refinement with greater offset range

Sjors Scheres <[log in to unmask]>

Sat, 9 Jan 2016 10:10:17 -0000

40 lines

New Thread

Deadline extended: Fully funded fellowships to participate in Structural Biology event in South America

Deadline extended: Fully funded fellowships to participate in Structural Biology event in South America

Claudia Alen Amaro <[log in to unmask]>

Wed, 6 Jan 2016 09:50:19 +0000

36 lines

New Thread

Display the SFC curve from the xml file generated from post-processing

Display the SFC curve from the xml file generated from post-processing

Li, Zongli <[log in to unmask]>

Thu, 14 Jan 2016 12:19:40 -0500

95 lines

Re: Display the SFC curve from the xml file generated from post-processing

Wang, Zhao <[log in to unmask]>

Thu, 14 Jan 2016 17:32:22 +0000

66 lines

Re: Display the SFC curve from the xml file generated from post-processing

Dong-Hua Chen <[log in to unmask]>

Thu, 14 Jan 2016 11:16:19 -0800

245 lines

Re: Display the SFC curve from the xml file generated from post-processing

Li, Zongli <[log in to unmask]>

Thu, 14 Jan 2016 14:32:18 -0500

71 lines

Re: Display the SFC curve from the xml file generated from post-processing

Li, Zongli <[log in to unmask]>

Thu, 14 Jan 2016 14:34:10 -0500

79 lines

Re: Display the SFC curve from the xml file generated from post-processing

Sjors Scheres <[log in to unmask]>

Thu, 14 Jan 2016 20:36:55 -0000

118 lines

Re: Display the SFC curve from the xml file generated from post-processing

Li, Zongli <[log in to unmask]>

Thu, 14 Jan 2016 16:50:26 -0500

133 lines

New Thread

Editing an MRC stack

Editing an MRC stack

Joshua Lobo <[log in to unmask]>

Tue, 5 Jan 2016 20:59:27 +0000

22 lines

Re: Editing an MRC stack

Ludtke, Steven J <[log in to unmask]>

Tue, 5 Jan 2016 21:28:04 +0000

43 lines

Re: Editing an MRC stack

Jude Short <[log in to unmask]>

Wed, 6 Jan 2016 09:15:03 +0000

37 lines

New Thread

Faculty position in the Department of Biophysics, NIMHANS, Bangalore, India

Faculty position in the Department of Biophysics, NIMHANS, Bangalore, India

Padmanabhan B <[log in to unmask]>

Sun, 10 Jan 2016 22:04:16 +0530

72 lines

New Thread

FW: Software Outlook programme survey

FW: Software Outlook programme survey

Martyn Winn <[log in to unmask]>

Tue, 12 Jan 2016 12:30:46 +0000

174 lines

New Thread

mask and loss of resolution

mask and loss of resolution

Laura van Bezouwen <[log in to unmask]>

Mon, 11 Jan 2016 10:18:29 +0100

71 lines

Re: mask and loss of resolution

Sjors Scheres <[log in to unmask]>

Mon, 11 Jan 2016 10:03:25 +0000

43 lines

Re: mask and loss of resolution

Celia Plisson-Chastang <[log in to unmask]>

Mon, 11 Jan 2016 11:30:30 +0100

63 lines

Re: mask and loss of resolution

Laura van Bezouwen <[log in to unmask]>

Mon, 11 Jan 2016 11:57:16 +0100

481 lines

Re: mask and loss of resolution

Sjors Scheres <[log in to unmask]>

Mon, 11 Jan 2016 12:56:44 +0000

260 lines

Re: mask and loss of resolution

Laura van Bezouwen <[log in to unmask]>

Mon, 11 Jan 2016 16:29:11 +0100

536 lines

New Thread

postdoc opportunity at Imperial College London

postdoc opportunity at Imperial College London

Bubeck, Doryen A <[log in to unmask]>

Wed, 20 Jan 2016 16:02:49 +0000

3162 lines

New Thread

Postdoc position at Imperial college, London

Postdoc position at Imperial college, London

Chaban, Yuriy <[log in to unmask]>

Tue, 5 Jan 2016 13:35:42 +0000

200 lines

New Thread

Postdoc position in cryoEM at Warwick University, UK - closing date 4th Feb

Postdoc position in cryoEM at Warwick University, UK - closing date 4th Feb

Smith, Corinne <[log in to unmask]>

Tue, 26 Jan 2016 14:08:22 +0000

427 lines

New Thread

Postdoctoral position in high-resolution cryo-EM at FSU

Postdoctoral position in high-resolution cryo-EM at FSU

M. Elizabeth Stroupe <[log in to unmask]>

Tue, 26 Jan 2016 15:08:08 -0500

437 lines

New Thread

Project manager in TEM

Project manager in TEM

Tom Burnley <[log in to unmask]>

Wed, 27 Jan 2016 16:23:19 +0000

5337 lines

New Thread

relion - relion terminate called after throwing an instance of 'RelionError'

relion - relion terminate called after throwing an instance of 'RelionError'

Wouter Van Putte <[log in to unmask]>

Thu, 14 Jan 2016 13:34:48 +0000

78 lines

Re: relion - relion terminate called after throwing an instance of 'RelionError'

Sjors Scheres <[log in to unmask]>

Thu, 14 Jan 2016 20:39:13 -0000

52 lines

New Thread

RELION to FREALIGN parameter conversion script

RELION to FREALIGN parameter conversion script

Joshua Lobo <[log in to unmask]>

Wed, 13 Jan 2016 21:28:37 +0000

23 lines

Re: RELION to FREALIGN parameter conversion script

Alexis Rohou <[log in to unmask]>

Thu, 14 Jan 2016 10:02:39 -0500

63 lines

Re: RELION to FREALIGN parameter conversion script

Joshua Lobo <[log in to unmask]>

Thu, 14 Jan 2016 12:18:37 -0500

509 lines

Re: RELION to FREALIGN parameter conversion script

Alexis Rohou <[log in to unmask]>

Sat, 16 Jan 2016 15:21:10 -0500

150 lines

New Thread

relion_preprocess greps ctf values from log files only?

relion_preprocess greps ctf values from log files only?

Grigory Sharov <[log in to unmask]>

Mon, 18 Jan 2016 10:29:49 +0100

76 lines

Re: relion_preprocess greps ctf values from log files only?

Sjors Scheres <[log in to unmask]>

Tue, 19 Jan 2016 08:10:24 -0000

55 lines

Re: relion_preprocess greps ctf values from log files only?

Yan Zhang <[log in to unmask]>

Tue, 19 Jan 2016 10:16:28 -0500

138 lines

Re: relion_preprocess greps ctf values from log files only?

Sjors Scheres <[log in to unmask]>

Tue, 19 Jan 2016 16:03:20 +0000

81 lines

New Thread

resolution for individual protein within a complex and relion

resolution for individual protein within a complex and relion

Pierre-Damien COUREUX <[log in to unmask]>

Tue, 26 Jan 2016 18:26:48 +0100

38 lines

Re: resolution for individual protein within a complex and relion

Axel Brilot <[log in to unmask]>

Tue, 26 Jan 2016 09:41:26 -0800

97 lines

Re: resolution for individual protein within a complex and relion

Sjors Scheres <[log in to unmask]>

Tue, 26 Jan 2016 19:22:41 -0000

81 lines

Re: resolution for individual protein within a complex and relion

Amédée des Georges <[log in to unmask]>

Tue, 26 Jan 2016 14:38:26 -0500

114 lines

Re: resolution for individual protein within a complex and relion

Minglei Zhao <[log in to unmask]>

Tue, 26 Jan 2016 11:35:07 -0800

78 lines

Re: resolution for individual protein within a complex and relion

Sjors Scheres <[log in to unmask]>

Tue, 26 Jan 2016 19:59:35 -0000

119 lines

Re: resolution for individual protein within a complex and relion

Amédée des Georges <[log in to unmask]>

Tue, 26 Jan 2016 15:03:52 -0500

161 lines

Re: resolution for individual protein within a complex and relion

Michael Saur <[log in to unmask]>

Tue, 26 Jan 2016 21:32:42 +0100

357 lines

Re: resolution for individual protein within a complex and relion

Tim Grant <[log in to unmask]>

Tue, 26 Jan 2016 16:11:45 -0500

482 lines

Re: resolution for individual protein within a complex and relion

Ludtke, Steven J <[log in to unmask]>

Tue, 26 Jan 2016 22:14:17 +0000

375 lines

Re: resolution for individual protein within a complex and relion

Jiang,Qiu-Xing <[log in to unmask]>

Fri, 29 Jan 2016 14:02:36 +0000

527 lines

Re: resolution for individual protein within a complex and relion

Reza Khayat <[log in to unmask]>

Fri, 29 Jan 2016 15:04:20 +0000

379 lines

New Thread

single precision compile for Relion 1.4

single precision compile for Relion 1.4

Christopher Akey <[log in to unmask]>

Mon, 25 Jan 2016 22:26:32 +0000

38 lines

Re: single precision compile for Relion 1.4

Xiaodi Yu <[log in to unmask]>

Mon, 25 Jan 2016 15:08:52 -0800

61 lines

New Thread

single precision Relion compile

single precision Relion compile

SUBSCRIBE CCPEM Christopher Akey <[log in to unmask]>

Mon, 25 Jan 2016 22:05:04 +0000

34 lines

Re: single precision Relion compile

Sjors Scheres <[log in to unmask]>

Tue, 26 Jan 2016 07:46:40 -0000

54 lines

New Thread

slow last iteration in autorefine

Re: slow last iteration in autorefine

Leonid Sazanov <[log in to unmask]>

Sat, 16 Jan 2016 12:27:40 +0000

69 lines

Re: slow last iteration in autorefine

Robert McLeod <[log in to unmask]>

Sat, 16 Jan 2016 13:32:51 +0000

100 lines

Re: slow last iteration in autorefine

Sjors Scheres <[log in to unmask]>

Sun, 17 Jan 2016 15:59:11 -0000

84 lines

Re: slow last iteration in autorefine

Leo Sazanov <[log in to unmask]>

Sun, 17 Jan 2016 18:40:40 +0100

110 lines

Re: slow last iteration in autorefine

Sjors Scheres <[log in to unmask]>

Sun, 17 Jan 2016 20:52:17 -0000

141 lines

Re: slow last iteration in autorefine

Robert McLeod <[log in to unmask]>

Sun, 17 Jan 2016 22:37:29 +0000

178 lines

Re: slow last iteration in autorefine

Reza Khayat <[log in to unmask]>

Mon, 18 Jan 2016 11:22:48 +0000

201 lines

Re: slow last iteration in autorefine

Sjors Scheres <[log in to unmask]>

Tue, 19 Jan 2016 08:32:51 -0000

235 lines

Re: slow last iteration in autorefine

Reza Khayat <[log in to unmask]>

Tue, 19 Jan 2016 14:46:03 +0000

544 lines

Re: slow last iteration in autorefine

Amedee des Georges <[log in to unmask]>

Tue, 19 Jan 2016 10:37:03 -0500

311 lines

Re: slow last iteration in autorefine

Sjors Scheres <[log in to unmask]>

Wed, 20 Jan 2016 07:57:54 -0000

300 lines

Re: slow last iteration in autorefine

Leonid Sazanov <[log in to unmask]>

Tue, 26 Jan 2016 14:28:06 +0100

167 lines

New Thread

The Astbury Conversation - Reminder

The Astbury Conversation - Reminder

Tom Burnley <[log in to unmask]>

Thu, 28 Jan 2016 12:08:25 +0000

191 lines

New Thread

unfiltered map from 3D classification

unfiltered map from 3D classification

Leonid Sazanov <[log in to unmask]>

Wed, 13 Jan 2016 11:22:00 +0000

28 lines

Re: unfiltered map from 3D classification

Sjors Scheres <[log in to unmask]>

Wed, 13 Jan 2016 18:41:25 -0000

49 lines

Re: unfiltered map from 3D classification

Sjors Scheres <[log in to unmask]>

Wed, 13 Jan 2016 19:13:02 -0000

79 lines

Re: unfiltered map from 3D classification

Leonid Sazanov <[log in to unmask]>

Thu, 14 Jan 2016 12:40:20 +0100

76 lines

New Thread

Vectorized RELION

Vectorized RELION

Dimitry Tegunov <[log in to unmask]>

Sun, 24 Jan 2016 21:38:54 +0000

50 lines

Re: Vectorized RELION

Sargis Dallakyan <[log in to unmask]>

Mon, 25 Jan 2016 15:53:50 -0500

497 lines

Re: Vectorized RELION

Dimitry Tegunov <[log in to unmask]>

Mon, 25 Jan 2016 22:20:35 +0000

20 lines

Re: Vectorized RELION

Sargis Dallakyan <[log in to unmask]>

Mon, 25 Jan 2016 18:14:05 -0500

117 lines

Re: Vectorized RELION

Dimitry Tegunov <[log in to unmask]>

Mon, 25 Jan 2016 23:26:32 +0000

24 lines

Re: Vectorized RELION

Ludtke, Steven J <[log in to unmask]>

Mon, 25 Jan 2016 23:42:20 +0000

300 lines

Re: Vectorized RELION

Sargis Dallakyan <[log in to unmask]>

Mon, 25 Jan 2016 19:16:29 -0500

77 lines

Re: Vectorized RELION

Dimitry Tegunov <[log in to unmask]>

Tue, 26 Jan 2016 01:19:03 +0000

18 lines

Re: Vectorized RELION

Sargis Dallakyan <[log in to unmask]>

Mon, 25 Jan 2016 23:11:33 -0500

173 lines

Re: Vectorized RELION

Sjors Scheres <[log in to unmask]>

Tue, 26 Jan 2016 07:44:08 -0000

122 lines

Re: Vectorized RELION

Dimitry Tegunov <[log in to unmask]>

Tue, 26 Jan 2016 20:18:58 +0000

28 lines

Re: Vectorized RELION

Robert McLeod <[log in to unmask]>

Wed, 27 Jan 2016 11:15:59 +0000

275 lines

Re: Vectorized RELION

Dimitry Tegunov <[log in to unmask]>

Fri, 29 Jan 2016 13:32:40 +0000

27 lines

Re: Vectorized RELION

Dimitry Tegunov <[log in to unmask]>

Fri, 29 Jan 2016 21:30:50 +0000

468 lines

New Thread

wwPDB Deposition & Annotation System Now Available for 3DEM Structures

wwPDB Deposition & Annotation System Now Available for 3DEM Structures

Cathy Lawson <[log in to unmask]>

Wed, 20 Jan 2016 15:26:38 -0500

45 lines

New Thread

[3dem] [ccpem] Adequate particle normalization prior to 2D classification?

Re: [3dem] [ccpem] Adequate particle normalization prior to 2D classification?

Nancy Meyer <[log in to unmask]>

Sun, 31 Jan 2016 21:18:55 +0000

1302 lines

Re: [3dem] [ccpem] Adequate particle normalization prior to 2D classification?

Nancy Meyer <[log in to unmask]>

Sun, 31 Jan 2016 21:18:55 +0000

1319 lines

Re: [3dem] [ccpem] Adequate particle normalization prior to 2D classification?

Nancy Meyer <[log in to unmask]>

Sun, 31 Jan 2016 21:25:50 +0000

3303 lines

Re: [3dem] [ccpem] Adequate particle normalization prior to 2D classification?

Nancy Meyer <[log in to unmask]>

Sun, 31 Jan 2016 21:25:50 +0000

3314 lines

Re: [3dem] [ccpem] Adequate particle normalization prior to 2D classification?

Nancy Meyer <[log in to unmask]>

Sun, 31 Jan 2016 22:10:40 +0000

2228 lines

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