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Dear Andreas,


> > > "better" in terms of the validity of the inference. Note that
> > > conjunctions across subjects  is a kind of "middle way" for
> > > multi-subject inferences which you may want to try, but you need to
> > > get the fixed effects analysis to work first.

> Is it true that in the conjunctions the testing is ensured by accounting
> the total variance on all contrasts whereas in the random effects the
> testing goes on the parameter estimate devided by the variance for each
> subject seperately?

Not quite.  A conjunction analysis is usually implemented at the
first-level (i.e. using a fixed effect analysis) where the inference is
based on within subject variability (a conjunction of effects at a
first-level can be used to generalize the inference to the population
of subjects using a confidence-interval type meta-analysis - see the
latest edition of NeuroImage).  A second-level or random effects
analysis uses the parameter estimates from the first level and,
implicitly, between subject variability.  Estimates of within-subject
variability from the first level do not enter into the second level.

With best wishes - Karl


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