Hi,
Have you tried GESAMT? See https://www.ccp4.ac.uk/html/gesamt.html#command-line-options
All the best,
Irwin
________________________________
From: CCP4 bulletin board <[log in to unmask]> on behalf of Manoj N <[log in to unmask]>
Sent: Thursday, March 2, 2023 7:45 AM
To: [log in to unmask] <[log in to unmask]>
Subject: [ccp4bb] Tools for structure-based multiple sequence alignment
Dear all,
We want to generate a structure-based multiple sequence alignment for a large number of homologous structures (>100).
What are the available programs (stand-alone or webserver) to do this?
Thank you,
Best wishes,
Manoj
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