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You can also use the Command key plus the tilda ~ to toggle through the active windows of a current application (so you need to still be in XQuartz). I’ve found this to be the quickest way to get back to the main Coot window.

 

Alice

 

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Alice Dawson

Structural Biologist

Division of Biological Chemistry and Drug Discovery

University of Dundee

Dow Street

Dundee DD1 5EH

 

 

 

From: CCP4 bulletin board <[log in to unmask]> on behalf of Nicholas Clark <[log in to unmask]>
Date: Wednesday, 8 March 2023 at 00:21
To: [log in to unmask] <[log in to unmask]>
Subject: Re: [ccp4bb] Coot crashes when delete side chain

 

CAUTION: This email originated from outside the University of Dundee. Do not click links or open attachments unless you recognise the sender's email address and know the content is safe.

Jinhua,

 

As Michael stated, ticking "keep delete active" will prevent the window from closing. Additionally, if you accidentally forget to do this, Coot does not actually crash. The window gets "hidden" or "minimized". If you right click on the XQuartz icon, you will see the window at the top of the menu as "Coot [Version]". Clicking it will restore the window to the viewscreen. It took me a while to realize this so figured I'd share.

 

Best,

 

Nick Clark

 

On Tue, Mar 7, 2023 at 5:11 PM Wu, Jinhua <[log in to unmask]> wrote:

Hi all,

 

I recently upgraded my iMac to a 6-Core Intel i5 running Ventura 13.2.1. I installed Coot 0.9.8.7 together with CCP4. Now every time when I select delete sidechain (or sidechain zone) and click on the residue, Coot crashes. Does anyone have the same problem or know the solution to this issue?

 

Thanks,

Jinhua

 


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Nicholas D. Clark (He/Him)

PhD Candidate

Malkowski Lab

University at Buffalo

Department of Structural Biology

Jacob's School of Medicine & Biomedical Sciences

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Buffalo, NY 14203

 

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