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Hi,


According to fMRIPrep: All slices are realigned in time to the middle of each TR.


Thanks,

Claire

________________________________
From: Christian Büchel <[log in to unmask]>
Sent: Wednesday, February 5, 2020 6:58:27 PM
To: [log in to unmask]
Cc: Pauley, Claire
Subject: AW: [SPM] microtime resolution and onset

Hi,

that depends on the reference slice that you have chosen for the slice timing correction.

Best,

Christian
--
Prof. Dr. Christian Büchel
Institut für Systemische Neurowissenschaften Haus W34, Universitätsklinikum Hamburg-Eppendorf Martinistr. 52, D-20246 Hamburg, Germany
Tel.: +49-40-7410-54726
Fax.: +49-40-7410-59955
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http://www.uke.uni-hamburg.de/institute/systemische-neurowissenschaften/


Von: SPM (Statistical Parametric Mapping) [mailto:[log in to unmask]] Im Auftrag von Pauley, Claire
Gesendet: Mittwoch, 5. Februar 2020 18:12
An: [log in to unmask]
Betreff: [SPM] microtime resolution and onset


Dear all,



I have interleaved multiband data with the following slice time information:

"SliceTiming": [0, 1.0625, 2.125, 0.87, 1.93, 0.6775, 1.7375, 0.4825, 1.545, 0.29, 1.3525, 0.0975, 1.16, 2.22, 0.965, 2.0275, 0.7725, 1.835, 0.58, 1.6425, 0.3875, 1.4475, 0.195, 1.255, 0, 1.0625, 2.125, 0.87, 1.93, 0.6775, 1.7375, 0.4825, 1.545, 0.29, 1.3525, 0.0975, 1.16, 2.22, 0.965, 2.0275, 0.7725, 1.835, 0.58, 1.6425, 0.3875, 1.4475, 0.195, 1.255, 0, 1.0625, 2.125, 0.87, 1.93, 0.6775, 1.7375, 0.4825, 1.545, 0.29, 1.3525, 0.0975, 1.16, 2.22, 0.965, 2.0275, 0.7725, 1.835, 0.58, 1.6425, 0.3875, 1.4475, 0.195, 1.255, 0, 1.0625, 2.125, 0.87, 1.93, 0.6775, 1.7375, 0.4825, 1.545, 0.29, 1.3525, 0.0975, 1.16, 2.22, 0.965, 2.0275, 0.7725, 1.835, 0.58, 1.6425, 0.3875, 1.4475, 0.195, 1.255]



The data was preprocessed using fMRIPrep (including slice time correction) and now I would like to create GLMs in SPM. The microtime resolution seems straightforward - enter number of slices (96). But how can I determine the microtime onset in my case?



Many thanks,

Claire

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