Thanks that works for me. It seems I wasn't in the userpath for executing startup.m. There is one more issue that I am facing with MELODIC. As soon as I input the 4D image in it, it displays an error message. I have attached it below. PFA *Regards,* *Ishi Tandon* *B.tech + M.tech - Cognitive & Neuroscience* *Amity University, Rajasthan* *contact - +918239259846 ; Email- [log in to unmask] <[log in to unmask]>* On Mon, Feb 24, 2020 at 4:25 PM paul mccarthy <[log in to unmask]> wrote: > Hi Ishi, > > Can you check the contents of your MATLAB path to ensure that startup.m > was actually called, and correctly added /use/local/fsl/etc/matlab/ to > the path? > > Paul > > On Feb 22 2020, at 1:43 pm, Ishi Tandon <[log in to unmask]> wrote: > > Dear FSL experts, > I am trying to run FSL commands through Matlab (version R2017b). But it > seems I can't do that. > Following the protocol as mentioned. I went to > /usr/local/fsl/etc/matlab/call_fsl.m. > I also set the path in the startup.m file in the matlab directory having > the following commands. > > % FSL Setup > setenv( 'FSLDIR', '/usr/local/fsl' ); > fsldir = getenv('FSLDIR'); > fsldirmpath = sprintf('%s/etc/matlab',fsldir); > path(path, fsldirmpath); > clear fsldir fsldirmpath; > > It still doesn't works for me. I would be grateful, if you could help me > with this. Thanks for your time. > > *Regards,* > *Ishi Tandon* > *B.tech + M.tech - Cognitive & Neuroscience* > *Amity University, Rajasthan* > *contact - +918239259846 ; Email- **[log in to unmask] > <[log in to unmask]>* > > To unsubscribe from the FSL list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1 > > > ------------------------------ > > To unsubscribe from the FSL list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1 > [image: Mailtrack] <https://mailtrack.io?utm_source=gmail&utm_medium=signature&utm_campaign=signaturevirality5&> Sender notified by Mailtrack <https://mailtrack.io?utm_source=gmail&utm_medium=signature&utm_campaign=signaturevirality5&> 02/24/20, 09:49:13 PM ######################################################################## To unsubscribe from the FSL list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1