cluster -i myinputimage -t 2.5 -o cluster_index --osize=cluster_size > cluster_info.txt
I do not know if myinputimage is any *tstat*.nii.gz file.
Thanks for the help!
Sincerely,
Andrade.
PD I forgot to mention in the processing stream I did
fslmaths GM_mod_merg -s 3.5 GM_mod_merg_s3.5
after this
randomise -i GM_mod_merg_s3 -m GM_mask -o fslvbm -d design.mat -t design.con -T -n 5000
I do not know if that is relevant and in that case how to fix it probably deleting output files from randomise and re-run from fslvbm_3_proc