fslreorient2std should also be applicable here, although note: you may still receive a warning message since the resulting files might have very slight numerical differences in their s/q-forms.

--------------------------------
Dr Matthew Webster
FMRIB Centre
John Radcliffe Hospital
University of Oxford

On 30 Aug 2019, at 15:23, Lily Wang <[log in to unmask]> wrote:

Hi Matt,

Thank you for your suggestions. Yes, they are in the same space. Would using fslreorient2std on both of them be an acceptable solution as well?

Thank you,
Lily

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