Hello SPM world,
I have a few questions about how to perform the group analysis in SPM12.
My questions are the following:
1. How to confirm that the group mean volume created by SPM is sensible and accurate?
One of my subjects appears to be tilted, meaning that the A-P line is
not centered in the middle of the image, like the rest of my subjects.
I'm guessing I have to fix this subject before moving forward but I'm
not sure how.
*data was preprocessed using fmriprep, which uses FreeSurfer for most of
the anatomical processing.1st-level analysis was also successfully done for all subjects.
2. How do I create the contrast design matrix containing all runs for all subjects?
I understand I need to use the beta nifty files of interest of all
subject in order to perform a 2nd-level analysis, but I don't know how
to specify my model with the conditions of my experimental paradigm: 3
feature classes (ex.color), each feature class has 6 possible values
(ex.magenta,teal,orange,...).
Any help is much appreciated.
Thank you,