Thanks Taylor - I'll ask students to give that a go.
And yes, we are using 6.0.0.
Will let you know whether this works!
Best, Andy
_____________________
Andy Lee
Associate Professor, Psychology, University of Toronto Scarborough,
Toronto, Canada.
Adjunct Scientist, Rotman Research Institute, Baycrest Centre, Toronto,
Canada.
www.leemtllab.com
On Fri, 22 Feb 2019 at 12:53, Taylor Hanayik <[log in to unmask]>
wrote:
> Andy,
>
> within the VM, open a terminal and try:
>
> sudo yum install openblas
>
> or
>
> sudo yum install openblas-devel
>
> You are using FSL 6.0.0 correct? You mentioned “latest” but just want to
> be sure of the version.
>
>
> Cheers,
>
> Taylor Hanayik
>
>
> Taylor Hanayik PhD
> FMRIB, John Radcliffe Hospital
> University of Oxford
> [log in to unmask]
>
>
>
>
>
> > On Feb 22, 2019, at 5:45 PM, Andy Lee <[log in to unmask]> wrote:
> >
> > Hi Taylor
> > This is actually through the standard FSL Windows VM installation.
> > Previous time I taught this course Windows-users had no issues (exact
> same data files) so it appears to have only cropped up with the latest FSL
> version release.
> > Best,
> > Andy
> > _____________________
> > Andy Lee
> > Associate Professor, Psychology, University of Toronto Scarborough,
> Toronto, Canada.
> > Adjunct Scientist, Rotman Research Institute, Baycrest Centre, Toronto,
> Canada.
> > www.leemtllab.com
> >
> >
> > On Fri, 22 Feb 2019 at 12:37, Taylor Hanayik <
> [log in to unmask]> wrote:
> > Hi Andy,
> >
> > Are you using FSL within the Windows Subsystem for Linux (WSL), or
> through a VM?
> >
> > if using the WSL installing libopenblas might help.
> >
> > try: sudo apt-get install libopenblas-base # from within the linux
> terminal
> >
> >
> >
> >
> > Cheers,
> >
> > Taylor Hanayik
> >
> >
> > Taylor Hanayik PhD
> > FMRIB, John Radcliffe Hospital
> > University of Oxford
> > [log in to unmask]
> >
> >
> >
> >
> >
> > > On Feb 19, 2019, at 5:25 PM, Andy Lee <[log in to unmask]> wrote:
> > >
> > > Hi all,
> > >
> > > I have a relatively urgent question.
> > >
> > > I'm currently teaching an fMRI intro class and those in the class with
> the latest Windows installation of FSL are unable to load 4D data into
> FEAT, getting the following error message:
> > >
> > > child process exited abnormally
> > > child process exited abnormally
> > > while executing
> > > "exec sh -c "${FSLDIR}/bin/fslnvols $thefile 2> /dev/null" "
> > > (procedure "feat5:updateimageinfo" line 9)
> > > invoked from within
> > > "feat5:updateimageinfo $w $i 1"
> > > (procedure "feat5:multiple_check" line 63)
> > > invoked from within
> > > "feat5:multiple_check .r 0 1 1 d"
> > > invoked from within
> > > ".dialog1.cancel invoke"
> > > ("uplevel" body line 1)
> > > invoked from within
> > > "uplevel #0 [list $w invoke]"
> > > (procedure "tk::ButtonUp" line 22)
> > > invoked from within
> > > "tk::ButtonUp .dialog1.cancel"
> > > (command bound to event)"
> > >
> > > The data file we are using works perfectly fine for students using the
> Mac and Linux installations of FSL, so it appears specific to the Windows
> installation.
> > >
> > > Does anyone have any ideas as to what is going on? I think another
> forum user posted a similar question but there hasn't been a response.
> > >
> > > Thanks! Andy
> > >
> > >
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