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This error sounds like it has nothing to do with FSL, but with the job scheduler of the cluster (you seem to have specified a non-existant job queue to be precise). I would suggest you ask the staff/cluster admin for details on howto setup your job script, as that is specific to the setup at your site. Good luck, Tim > On February 11, 2019 at 1:45 PM Richard Rees <[log in to unmask]> wrote: > > > Hi all, > > I have successfully run fslvbm_1_bet -N on my files on the cluster, viewed the images and am happy to move on. > I have tried `fslvbm_2_template -n` and get the following error: > > Unable to run job: Job was rejected because job requests unknown queue "short.q". > Exiting. > Running segmentation: ID= > Running initial registration: ID=The command you have requested cannot be found or is not executable > Creating first-pass template: ID=The command you have requested cannot be found or is not executable > Running registration to first-pass template: ID=The command you have requested cannot be found or is not executable > Creating second-pass template: ID=The command you have requested cannot be found or is not executable > > I then tried putting 'fsl_sub -q short.q fslvbm_2_template -n' but receive: > Invalid queue specified! > > Any comments appreciated. > > TIA > > Richard > > ######################################################################## > > To unsubscribe from the FSL list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1 > -- Tim ######################################################################## To unsubscribe from the FSL list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1