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Hi. I am trying to use autoproc to process HDF5 files using the command
process -d test5 -noANO

and am getting the following errors

HDF5-DIAG: Error detected in HDF5 (1.10.4) thread 140736974844864:
  #000: H5L.c line 805 in H5Lexists(): not a location
    major: Invalid arguments to routine
    minor: Inappropriate type
  #001: H5Gloc.c line 246 in H5G_loc(): invalid object ID
    major: Invalid arguments to routine
    minor: Bad value
HDF5-DIAG: Error detected in HDF5 (1.10.4) thread 140736974844864:
  #000: H5L.c line 805 in H5Lexists(): not a location
    major: Invalid arguments to routine
    minor: Inappropriate type
  #001: H5Gloc.c line 246 in H5G_loc(): invalid object ID
    major: Invalid arguments to routine
    minor: Bad value
HDF5-DIAG: Error detected in HDF5 (1.10.4) thread 140736974844864:
  #000: H5L.c line 805 in H5Lexists(): not a location
    major: Invalid arguments to routine
    minor: Inappropriate type
  #001: H5Gloc.c line 246 in H5G_loc(): invalid object ID
    major: Invalid arguments to routine
    minor: Bad value
HDF5-DIAG: Error detected in HDF5 (1.10.4) thread 140736974844864:
  #000: H5L.c line 805 in H5Lexists(): not a location
    major: Invalid arguments to routine
    minor: Inappropriate type
  #001: H5Gloc.c line 246 in H5G_loc(): invalid object ID
    major: Invalid arguments to routine
    minor: Bad value
HDF5-DIAG: Error detected in HDF5 (1.10.4) thread 140736974844864:
  #000: H5L.c line 805 in H5Lexists(): not a location
    major: Invalid arguments to routine
    minor: Inappropriate type
  #001: H5Gloc.c line 246 in H5G_loc(): invalid object ID
    major: Invalid arguments to routine
    minor: Bad value
 ERROR: [find_images-0002] unable to get listing
ERROR: [x_check-0010] see above
ERROR: [process-0023] during initial checks – see above

If anyone is able to help I would really appreciate it. Thank you!

Bri Bibel
PhD candidate
Cold Spring Harbor Laboratory

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