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Hi Paul, Thank you very much Paul. I didn't work for FSL 5.0.9. I had to install FSL 6.0 combining with the firefox trick everything works ! Arnaud Le mar. 22 janv. 2019 à 10:22, paul mccarthy <[log in to unmask]> a écrit : > Hi Arnaud, > > Thee HTML pge is a bit buggy even under firefox - you should be able > to view the plot by right-clicking on the top frame and selecting > "This Frame -> Reload Frame". > > Your commands run fine for me (using FSL 5.0.11). I would suggest > trying to run the pnm_evs command directly, rather than through a > script. > > Cheers, > > Paul > > On 22/01/2019, Arnaud Boré <[log in to unmask]> wrote: > > Hi, > > > > Sorry, I uploaded again with the output. > > > > Arnaud > > > > > > Le mar. 22 janv. 2019 à 09:33, paul mccarthy <[log in to unmask]> a > > écrit : > > > >> Hi Arnaud, > >> > >> There os no output in the file you uploaded - would you be able to > >> upload the output that PNM produced? > >> > >> Cheers, > >> > >> Paul > >> > >> On 22/01/2019, Arnaud Boré <[log in to unmask]> wrote: > >> > Hi Paul, > >> > > >> > I uploaded the file using the link you provided. > >> > > >> > I tried with firefox and could not see the plot. > >> > > >> > Thank you very much for your help > >> > > >> > Arnaud > >> > > >> > Le mar. 22 janv. 2019 à 04:47, paul mccarthy <[log in to unmask] > > > >> > a > >> > écrit : > >> > > >> >> Hi Arnaud, > >> >> > >> >> The link in your first email appears to be invalid - would you be > able > >> >> to upload the files again, to: > >> >> https://oxfile.ox.ac.uk/oxfile/work/extBox?id=6753706EEE157A9473 > >> >> > >> >> Are you using firefox to view the report? Other browsers are known to > >> >> be problematic. > >> >> > >> >> Cheers, > >> >> > >> >> Paul > >> >> > >> >> On 22/01/2019, Arnaud Boré <[log in to unmask]> wrote: > >> >> > Dear FSL experts, > >> >> > > >> >> > Sorry to ask again but can somebody take few minutes to look at > this > >> >> issue > >> >> > ? > >> >> > If I were able to see the plot after the first step of the PNM it > >> would > >> >> > definitively help me understand why the pnm_evs step does not work. > >> >> > > >> >> > Thank you again in advance > >> >> > Arnaud > >> >> > > >> >> > Le jeu. 17 janv. 2019 à 15:12, Arnaud Boré <[log in to unmask]> > a > >> >> écrit > >> >> > : > >> >> > > >> >> >> Dear FSL experts, > >> >> >> > >> >> >> I try to use PNM and then use the output for FEAT. I run into some > >> >> errors > >> >> >> when running pnm_evs: > >> >> >> > >> >> >> An exception has been thrown > >> >> >> Logic error:- detected by Newmat: index error: requested index = 2 > >> >> >> > >> >> >> MatrixType = Rect # Rows = 0; # Cols = 1 > >> >> >> Trace: main. > >> >> >> > >> >> >> In addition the html files don't give me any plot. > >> >> >> > >> >> >> I uploaded all the files using the fsl link here > >> >> >> <https://oxfile.ox.ac.uk/oxfile/work/extBox?id=700839B35190E48BF> > >> >> >> (pnm_abore.tar.gz) as well as the code to reproduce the error. > >> >> >> > >> >> >> I would be really thankfull if you can take a little bit of time > to > >> >> >> look > >> >> >> at it. > >> >> >> > >> >> >> Again thank you very much for your help > >> >> >> Arnaud > >> >> >> > >> >> > > >> >> > > >> >> > -- > >> >> > Arnaud BORE > >> >> > Research assistant > >> >> > Cellulaire : (001) 514-398-5564 > >> >> > > >> >> > > >> ######################################################################## > >> >> > > >> >> > To unsubscribe from the FSL list, click the following link: > >> >> > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1 > >> >> > > >> >> > >> >> > ######################################################################## > >> >> > >> >> To unsubscribe from the FSL list, click the following link: > >> >> https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1 > >> >> > >> > > >> > > >> > -- > >> > Arnaud BORE > >> > Research assistant > >> > Cellulaire : (001) 514-398-5564 > >> > > >> > > ######################################################################## > >> > > >> > To unsubscribe from the FSL list, click the following link: > >> > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1 > >> > > >> > >> ######################################################################## > >> > >> To unsubscribe from the FSL list, click the following link: > >> https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1 > >> > > > > > > -- > > Arnaud BORE > > Research assistant > > Cellulaire : (001) 514-398-5564 > > > > ######################################################################## > > > > To unsubscribe from the FSL list, click the following link: > > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1 > > > > ######################################################################## > > To unsubscribe from the FSL list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1 > -- Arnaud BORE Research assistant Cellulaire : (001) 514-398-5564 ######################################################################## To unsubscribe from the FSL list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1